Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi375g00052 ATGATGGGTGAAGGACTTTCTGGTTTGGGTATTAAAGAACTACAAAACCTGGAAAACCAGCTGGAGATGAGTTTGAAGGGTGTTCGCATGAAAAAGGATCAAATTTTGAGTGATGAGATTAAAGAACTACACCAAAAGGGAAATCTCATTCATCAAGAAAATATAGAACTCTATAAAAAGATGGAAATCATCCAAAAAGAAAATGCAGAGCTCCAGAAGAAGGTTTATGAAGCAAGGAGTACAAATGAAGAAAATGCAGCATCCAATCCTTCATGCACTATCAGAAATGGATATGATTTACATGCACCTATCAGTCTCCAGCTAAGCCAGCCACGGCCTCAACACAGTGAACCACCGGGCAAAGCAATGAAACTAGGATTACAGCTGCATTAG 393 0.3944 MMGEGLSGLGIKELQNLENQLEMSLKGVRMKKDQILSDEIKELHQKGNLIHQENIELYKKMEIIQKENAELQKKVYEARSTNEENAASNPSCTIRNGYDLHAPISLQLSQPRPQHSEPPGKAMKLGLQLH 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi375g00052 130 MobiDBLite consensus disorder prediction 109 130 - -
Sebi375g00052 130 Coils Coil 54 86 - -
Sebi375g00052 130 ProSiteProfiles K-box domain profile. 1 67 IPR002487 GO:0003700|GO:0005634|GO:0006355
Sebi375g00052 130 Coils Coil 11 31 - -
Sebi375g00052 130 Pfam K-box region 1 61 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi375g00052 Sebi-Chr375 551355 552263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi375g00052 1 125 MADS-box Gene Family AT3G57230 48.062 1.35e-32 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi375g00052 K09264 - gmx:100808145 213.772