Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi375g00045 ATGGCTGGTTTCCCTGCAACAACTCATGCATTCTGTTTTGTAATGAGAATCATTTTCTTGCTCCATATGATTACTTTGGTAAACACACTTTCATTTCATTACCAAGGATTTCAGAATGATGATGCCATACTAGAAGGAGATGCTTCTCTGTGGCGTTCAGTAATCCAACTCACTGTGACCTCAAGGTACCAAAGCAATGCTTACAGTGTTGGGCGAGTCAAAGGTCTTGAGTCATTGCACCTGTGGGAGTCGGAAATGGGCTCAAGAAAAAAACTCACTGACTTCTCTACCCAATTTTCCTTTGAAATTTTCTCAAATCAGACTAGTTTTGGAGATGGCTTGGCATTTTTCCTTGCAGATCCAGAGCTGCCACTTTTAAGGAGAATAAAAGAAGGAGGTGGTCTTGGTTTGGTGGATGGTAATCAAGAATCAAACTCAACTAAACATTCATTTGTAGCAGTAGAGTTTGACACACACACAAATCCATGGGATCCACCAGGCACTCATGTAGGTATAAACTTGAACTCAATGACATCTCACAAAACTGTGCCATGGTTGGTTGATATTAGGCAAATGAAAGTTTATTATTGTAGAATTGAGTACAGTGCCAGTACTCATAATTTGGAAGTTACTTTCACTGGAAACAAAGCTGCTACAGGAGATAATTTTGAGATGAATACATTGTGGTCATGGTCATTCAATTCAAGTTTGCAAACTAATGAGACTGTATCAGATCAGATACCTCCAATGGCAGCCTCACCAATCCCAAATCCTAATCCTTCACCACTTCCCACACCTGAGAAAAAGAGCAAAAAAGGACTATTGGTAGGGCTAGGAGTTGGTATAGGCAAGGCTGCATGCTTCCTTATTTTAGGGTTGGTTTGTATTATAATGTGGAAAAGGGCTAAAGGGAAAAAAGAAGATTCATTTTCTGACCTGAAAATGGATGATGAATTCCAAAAAGGCACTGGACCTAAGAGGTTTTGCTATAATCAATTGGTAAGTGCAACAAATAACTTTGCAGAAGCTCAGAAGATTGGACAAGGTGGATTTGGGGGTGTTTATAAAGGCTATTTGAAAGACTTGAACTCCTATGTTGCTATAAAGAGGATATCAAGAGAGTCTAGGCAGGGGATAAAGGAATATGCATCTGAAGTGAAAATCATTAGCCAACTGAGGCATAGGAATTTAGTACAACTAATTGGTTGGTGCCATAGGAATAAAGATCTCCTCCTTATATATGAGTTCATGCAGAATGGTAGCTTAGATTCCCACCTATATCATGGAAAAAGCATCTTGACATGGCAGATGAGATACAACATTGCTATGGACTTGGCTTCAGCACTTTTGTACCTTCATGAAGAATGGGAGCAGTGTGTGCTTCATAGGGACATTAAACCCAGCAACATTATGTTGGACTCCAGTTTCAATGCTAAGCTTGGGGATTTTGGCTTAGCTAGGTTGGTGGATCATGAGAAAGGATCACAAACCACAGTTATAGCAGGGACAAGGGGTTACATAGCCCCTGAATATTTCACTACAGGGAAGGCTAAGAAAGAATCTGATATATACAGTTTTGGAATTGTTTCATTGGAGTTAGCCAGTGGAAGAAAACCAATTGACCTTAATGCCACTGAGGGTCAAATAACCATATTTGAATGGGTTTGGGAGCTTTATAGATTAGGACGGTTCCTTGAAGTAGTGGACAAAAAACTTGGGGAAGCATTTGATAAGGAACAGATGGAACGTTTAGTGGTTGTTGGCCTTTGGTGTGCCAATCCAGATTATTCATTCAGGCCATCTATAAGGCAATTGATTCAAGTGCTTAAACTTGAAGCTCCTTTACCAGTTCTCCCCCAGAAGATACCTGATCCAACTTACCATCCTCCAACAATGAGTTCAATCTTTGATTCAGTTTCTTCTCCCTTTCCGCGTTAG 1938 0.4014 MAGFPATTHAFCFVMRIIFLLHMITLVNTLSFHYQGFQNDDAILEGDASLWRSVIQLTVTSRYQSNAYSVGRVKGLESLHLWESEMGSRKKLTDFSTQFSFEIFSNQTSFGDGLAFFLADPELPLLRRIKEGGGLGLVDGNQESNSTKHSFVAVEFDTHTNPWDPPGTHVGINLNSMTSHKTVPWLVDIRQMKVYYCRIEYSASTHNLEVTFTGNKAATGDNFEMNTLWSWSFNSSLQTNETVSDQIPPMAASPIPNPNPSPLPTPEKKSKKGLLVGLGVGIGKAACFLILGLVCIIMWKRAKGKKEDSFSDLKMDDEFQKGTGPKRFCYNQLVSATNNFAEAQKIGQGGFGGVYKGYLKDLNSYVAIKRISRESRQGIKEYASEVKIISQLRHRNLVQLIGWCHRNKDLLLIYEFMQNGSLDSHLYHGKSILTWQMRYNIAMDLASALLYLHEEWEQCVLHRDIKPSNIMLDSSFNAKLGDFGLARLVDHEKGSQTTVIAGTRGYIAPEYFTTGKAKKESDIYSFGIVSLELASGRKPIDLNATEGQITIFEWVWELYRLGRFLEVVDKKLGEAFDKEQMERLVVVGLWCANPDYSFRPSIRQLIQVLKLEAPLPVLPQKIPDPTYHPPTMSSIFDSVSSPFPR 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi375g00045 645 CDD lectin_legume_LecRK_Arcelin_ConA 30 237 IPR001220 GO:0030246
Sebi375g00045 645 ProSitePatterns Legume lectins beta-chain signature. 152 158 IPR019825 -
Sebi375g00045 645 FunFam L-type lectin-domain containing receptor kinase IX.1 325 416 - -
Sebi375g00045 645 MobiDBLite consensus disorder prediction 251 265 - -
Sebi375g00045 645 Pfam Protein kinase domain 341 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi375g00045 645 CDD STKc_IRAK 346 610 - -
Sebi375g00045 645 ProSiteProfiles Protein kinase domain profile. 340 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi375g00045 645 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 240 IPR013320 -
Sebi375g00045 645 SUPERFAMILY Protein kinase-like (PK-like) 324 629 IPR011009 -
Sebi375g00045 645 PANTHER - 61 613 - -
Sebi375g00045 645 SMART serkin_6 340 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi375g00045 645 ProSitePatterns Protein kinases ATP-binding region signature. 346 369 IPR017441 GO:0005524
Sebi375g00045 645 FunFam Lectin-domain containing receptor kinase A4.3 417 629 - -
Sebi375g00045 645 Pfam Legume lectin domain 30 213 IPR001220 GO:0030246
Sebi375g00045 645 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Sebi375g00045 645 Gene3D Phosphorylase Kinase; domain 1 325 416 - -
Sebi375g00045 645 MobiDBLite consensus disorder prediction 246 268 - -
Sebi375g00045 645 Gene3D Transferase(Phosphotransferase) domain 1 417 628 - -
Sebi375g00045 645 Gene3D - 27 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi375g00045 Sebi-Chr375 489866 491884 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi375g00045 91 628 Receptor kinase-like Gene Family AT5G10530 45.660 1.08e-162 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Sebi375g00045 Pkinase 1.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi375g00045 - - aprc:113852043 941.414