Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi375g00042 ATGATGGATATTCAAAGCAGCTCAGAATTGAATGAAACTACACATATGCTTCCACCTCCCCCTGGCACATTTGTAGATCGTGAAGAACTCATCCAGTATGTTGGAGACTTTGCTGTGTCACAAGGATATGTGGTCACTATCAAGCAATCCAAGAGGGACAAAGTAGTTGTACTTGGTTGTGACAGAGGGGGTGTTTATCGCAACCGGCGAAAATCTATTGAGGAGTCCTCAGCTGAACATAGCCGCAAAAGAAAAACTGGTTCACGTCTAACAAATTGTCCTTTTGAAGCTGTGGGCAAGAAGGAAGATGGCTTGTGGGTACTCACCATAAAAAATGGAACACATAATCATGAGCCATTAAGGGACATTTCAGAACATCCTTCTGCTCGTCGCTTCACGGAGAGCGAAGTTTTGCTCATTAAAGAAATGACAGAAGCTGGGTTTAAACCTCGACAAATTCTAAAGAGGCTGAGACAAAGCAATCCAGAACTTTTATCAACCCCAAAGCATGTTTATAATGTTAAAGCTAAGCTTAGACAAGGAAACATGAATGTTAGGAATTTCAAGTCACTGAGACCCGAGAAATCTGCTGTAAGAAATAATTATCTTGCAGTAATTGAACCATCATGGAGGCAGCGCAACCCTCCGAGGGTTCCCAATCTTATTGGAGGCAGATTTGTTGATTCACAGTCATATGAATCAATTGACATTTTAAACCCTGCAAGCCAGCAAGTTGTTTCTCAAGTTCCAATGACTACAGATGAGGAGTTCAAAGCTGCAGTATTTTCAGCAAAACGGGCGTTTTCATCATGGCGTAACATGCCAATTACCACTCGGCAGAGAATCATGTTTAAGTTCCAAGAGCTTATTCATAGGGACATTGATAAGATTGCTATGAATATTAGTACTGAACATGGGAAAACACTGCGAGATGCATATGGTGATGTGTCACGCGGGCTAGAGGTTGTTGAACATGCTTGTGGTATGGCAAATCTGCAAAAGGGGGAATTTGTTCCCAATGTGTCCAATGGAATAGACACATACAGCATTAGAGAGCCTCTTGGTGTTTGTGCTGGTATCTGCCCTTTTGACTTCCCGGCTATGATTCCCTTATGGATGTTTCCTATTGCTGTCACATGTGGCAATACATTTATTCTAAAGCCGTCAGAGAAGGATCCAGGGGCAGCTATGGTGCTGGCAGAGTTAGCAATAGAGGCTGGTATACCTAATGGCGTGTTGAATATTGTTCATGGTACAAATGACATTGTCAAAGCTATCTGTGATGATGGTGATATAAAAGCTGTCTCCTTTGTTGGTTCAGATACAGTTGGTGCTTATGTATATGCAAGAGCATCTACTAAAGGTAAACGTGTTCAGTCCAATATTGGAGCCAAAAATCATGCTGTCATAATGCCTGATGCAAGAGAGGATGCTACTTTGAAAGCTCTGGTTACAGCTGGTTTTGGTGCTGCTGGACAGAAGTGCACAGCACTGAGTGCTGTTGTTTTCGTTGGAAGTTTCAAACAATGGGAAGATAAACTAGTAGAGCATGCCAGAGCACTTAAGGTCAATGCTGGAACAGAACCAGACACAGACCTTGGTCCAGTTATCAACAAACAGGCAAAGGAACACACTTGCAGATTGGTTCAAAAAGGTGTGGAATCTGGTGCAAAACTAGTGCTTGATGGCCGAAACATTGTGGTTCCAGGATATGAACACGGAAACTTCATTGGTCCCACCATCTTATCTGATGTCACAGTTGACATGGAATGCTACAAGGAGGAGATTCTTGGCCCAGTTCTTTTGTGTATGGAGGTTGACAGAATGCAAGAAGCCATAAACATCGTCAACAGCAACAAATATGGTACTGGAGCTTCCATTTTTACAACTTCGAGTGCAGCTGCAAGAAAATTCCAGACTGAGGTTGAAGTTGGACAGGTTGGCATAAATGTCCCCATCTCTGTTTCGTTGCCCTTTTCTTCCTTCATTAGCTCCAGGCCATCTTTTGTTGGTGATTTGAATTTTGATGGCAGAGCTGGAATTCAATTTTACACGCAGATTAAGACTGTTACTAAACAATGGGCAGACTCATTAGACGGAGATGAAACTCCTCTTGAAATGCCATGTGCTTAG 2133 0.4252 MMDIQSSSELNETTHMLPPPPGTFVDREELIQYVGDFAVSQGYVVTIKQSKRDKVVVLGCDRGGVYRNRRKSIEESSAEHSRKRKTGSRLTNCPFEAVGKKEDGLWVLTIKNGTHNHEPLRDISEHPSARRFTESEVLLIKEMTEAGFKPRQILKRLRQSNPELLSTPKHVYNVKAKLRQGNMNVRNFKSLRPEKSAVRNNYLAVIEPSWRQRNPPRVPNLIGGRFVDSQSYESIDILNPASQQVVSQVPMTTDEEFKAAVFSAKRAFSSWRNMPITTRQRIMFKFQELIHRDIDKIAMNISTEHGKTLRDAYGDVSRGLEVVEHACGMANLQKGEFVPNVSNGIDTYSIREPLGVCAGICPFDFPAMIPLWMFPIAVTCGNTFILKPSEKDPGAAMVLAELAIEAGIPNGVLNIVHGTNDIVKAICDDGDIKAVSFVGSDTVGAYVYARASTKGKRVQSNIGAKNHAVIMPDAREDATLKALVTAGFGAAGQKCTALSAVVFVGSFKQWEDKLVEHARALKVNAGTEPDTDLGPVINKQAKEHTCRLVQKGVESGAKLVLDGRNIVVPGYEHGNFIGPTILSDVTVDMECYKEEILGPVLLCMEVDRMQEAINIVNSNKYGTGASIFTTSSAAARKFQTEVEVGQVGINVPISVSLPFSSFISSRPSFVGDLNFDGRAGIQFYTQIKTVTKQWADSLDGDETPLEMPCA 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi375g00042 710 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 53 708 IPR010061 GO:0004491
Sebi375g00042 710 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 222 665 IPR016162 GO:0016491
Sebi375g00042 710 FunFam Methylmalonate-semialdehyde dehydrogenase [acylating] 222 469 - -
Sebi375g00042 710 Pfam Aldehyde dehydrogenase family 226 690 IPR015590 GO:0016491
Sebi375g00042 710 NCBIfam CoA-acylating methylmalonate-semialdehyde dehydrogenase 220 694 IPR010061 GO:0004491
Sebi375g00042 710 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 463 663 IPR016163 GO:0016620
Sebi375g00042 710 MobiDBLite consensus disorder prediction 1 23 - -
Sebi375g00042 710 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 488 499 IPR016160 GO:0016491
Sebi375g00042 710 FunFam Methylmalonate-semialdehyde dehydrogenase (Acylating) 463 663 - -
Sebi375g00042 710 SUPERFAMILY ALDH-like 210 695 IPR016161 GO:0016491
Sebi375g00042 710 CDD ALDH_F6_MMSDH 218 694 IPR010061 GO:0004491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi375g00042 Sebi-Chr375 449136 458334 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi375g00042 187 678 Aldehyde Dehydrogenase Gene Family AT2G14170 71.197 0.0 737
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi375g00042 K00140 - cave:132177147 1178.31