Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi375g00041 ATGGCAAACGCTCATTTATCAACTCAACGTACTCCGCCGAGGGTTCCAAATCTCATCGGTGGCAAATTTGTCGAGTCAAAATCATTGTCTTTCATTGATGTTATCAACCCTGTAGCAACGCAAGAAGTTGTTTCTCAACTTCCTTTGACTACAGATGAAGAGTTTAAAGCTGCAGTAGCTGCAGCAAAGAAGGCATTTCCAGCATGGCGTAACACTCCAATCACAAAACGCCAACGTGTTATGTTGAAGTTCCAGGAGCTTATACGCAGGGATATGGATAAACTTGCCCTGAATGTGACCACTGAACAAGGAAAGACATTAAAGGATGCACAAGGAGATGTATTCCGTGGTTTAGAGGTGGTGGAACATGCTTGTGGGATGGCAACTCTACAGATGGGGGAGTATGCTTCCAATGTATCACGTGGAATTGATACCTTCAGCATTAGAGAACCACTTGGTGTTTGTGCCGGTATTTGTCCGTTCAACTTTCCTGTTATGATTCCCTTGTGGATGTTCCCAATTGCAGTTACCTGTGGCAATACCTTTATTCTAAAACCATCAGAGAAAGATCCAGGTGCTTCTATAATGCTTGCAGAATTGGCAATGGAAGCTGGTTTGCCAGAGGGTGTCTTAAATATAGTTCATGGAACCCATGATGTTGTAAATGCTATTTGTGATCATGAAGACATCAAAGCCATATCTTTTGTTGGTTCAAATGTTGCTGGAATGCACATATATGCAAGAGCAGCAGCTAAAGGGAAACGTGTTCAGTCTAATATGGGGGCCAAGAATCATGCGGTTGTCATGCCTGATGCAAGTGCTGATGATACTATAAATGCTTTAGTTGCTGCGGGTTTTGGTGCTGCTGGACAAAGGGAAAGTAAACTTGTGGAGCGTGCCAAATCTCTTAAAGTAAATGCTGGAACTGAACCTGATGCTGACCTTGGTCCAGTCATTAGCAAACAGGCAAAGGAGCGAATACACAAATTAATTCAATCTGGGTTTGACAGTGGTGCCAGACTAGTGCTTGATGGAAGAAGTCCCCAATATGAATCTGGTAATTTTATTGGTCCAACCATCTTGGCAGATGTCACTGCCGATATGGAATGCTACAAGGAGGAGATTTTGGCCCAGTTCTTCTTCTCATGGAGGTATGGAAATGGTGCTACTATATTTACTAAATCCGGTGTGGCTGCAAGAAAATTTCAGACAGAGATCGAGGCTGGGCAGGTGGGCATCAACGTTCCCATTCCTGTTCCTTTACCCTTTTTCTCTTTTACTGGCAACAAGGCATCATTTGCAGGCGATCTCAATTTCTATGGCAAGGCAGGGGTTAACTTTTATACACAGATCAAAACAATAACGCAGCAGTGGAAGGATTCAGCTAGCGCGGAGAAGATTAACTTGGCAATGCCAACCTCTCAAAAATCTTGA 1434 0.4338 MANAHLSTQRTPPRVPNLIGGKFVESKSLSFIDVINPVATQEVVSQLPLTTDEEFKAAVAAAKKAFPAWRNTPITKRQRVMLKFQELIRRDMDKLALNVTTEQGKTLKDAQGDVFRGLEVVEHACGMATLQMGEYASNVSRGIDTFSIREPLGVCAGICPFNFPVMIPLWMFPIAVTCGNTFILKPSEKDPGASIMLAELAMEAGLPEGVLNIVHGTHDVVNAICDHEDIKAISFVGSNVAGMHIYARAAAKGKRVQSNMGAKNHAVVMPDASADDTINALVAAGFGAAGQRESKLVERAKSLKVNAGTEPDADLGPVISKQAKERIHKLIQSGFDSGARLVLDGRSPQYESGNFIGPTILADVTADMECYKEEILAQFFFSWRYGNGATIFTKSGVAARKFQTEIEAGQVGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVNFYTQIKTITQQWKDSASAEKINLAMPTSQKS 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi375g00041 477 CDD ALDH_F6_MMSDH 15 458 IPR010061 GO:0004491
Sebi375g00041 477 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 384 423 IPR016163 GO:0016620
Sebi375g00041 477 FunFam Methylmalonate-semialdehyde dehydrogenase [acylating] 19 267 - -
Sebi375g00041 477 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 424 454 IPR016162 GO:0016491
Sebi375g00041 477 FunFam Methylmalonate-semialdehyde dehydrogenase (Acylating) 261 427 - -
Sebi375g00041 477 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 261 292 IPR016163 GO:0016620
Sebi375g00041 477 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 294 376 IPR016163 GO:0016620
Sebi375g00041 477 SUPERFAMILY ALDH-like 10 459 IPR016161 GO:0016491
Sebi375g00041 477 NCBIfam CoA-acylating methylmalonate-semialdehyde dehydrogenase 17 458 IPR010061 GO:0004491
Sebi375g00041 477 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 19 260 IPR016162 GO:0016491
Sebi375g00041 477 Pfam Aldehyde dehydrogenase family 23 376 IPR015590 GO:0016491
Sebi375g00041 477 Pfam Aldehyde dehydrogenase family 384 454 IPR015590 GO:0016491
Sebi375g00041 477 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 6 474 IPR010061 GO:0004491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi375g00041 Sebi-Chr375 439206 444657 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi375g00041 7 442 Aldehyde Dehydrogenase Gene Family AT2G14170 74.735 0.0 712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi375g00041 K00140 - gmx:100783569 814.298