Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi374g00036 ATGGGAAAGTCCTACCCAACCGTGAGCCCTGATTACCAGAAGGCCGTTGAGAAGGCCAAGAAGAAGCTTAGGGGTCTCATCGCTGAGAAGAGATGCGCTCCTCTAATGCTCCGTTTGGCATGGCACTCTGCTGGTACCTTTGACGTGAAGACAAGGACCGGTGGTCCCTTCGGAACCATGAAGCACTCAGCTGAACTTGCCCACGGTGCTAACAACGGTCTTGATATCGCTGTTAGACTATTGGAGCCGCTCAAGGAGCAGTTCCCTATTTTGTCCTACGCTGATTTCTACCAGTTGGCTGGTGTTGTTGCCGTTGAGGTCACTGGTGGACCTGAAGTTCCTTTCCACCCCGGAAGAGAGGACAAGCCCGAGCCACCACCTGAGGGTCGCCTGCCTGATGCAACCAAGGGTTCTGACCATTTGAGGGATGTATTTGTCAAAGCTATGGGGCTTACTGATCAGGATATTGTTGCTCTTTCTGGTGGCCATACCATTGGAGCTGCACACAAGGAGCGTTCTGGATTTGAGGGTCCCTGGACTTCTAATCCTCTTATTTTTGACAACTCATACTTTAAGGAGCTGTTGAGTGGTGAGATGGAAGGCCTCCTTCAACTTCCAAGTGACAAGGCACTCTTGAATGACCCAGTTTTCCGTCCTCTTGTTGAGAAATATGCTGCGGATGAAGATGCTTTCTTTGCTGATTACGCTGACGCTCATCAAAAGCTCTCTGAACTTGGGTAA 741 0.5034 MGKSYPTVSPDYQKAVEKAKKKLRGLIAEKRCAPLMLRLAWHSAGTFDVKTRTGGPFGTMKHSAELAHGANNGLDIAVRLLEPLKEQFPILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEPPPEGRLPDATKGSDHLRDVFVKAMGLTDQDIVALSGGHTIGAAHKERSGFEGPWTSNPLIFDNSYFKELLSGEMEGLLQLPSDKALLNDPVFRPLVEKYAADEDAFFADYADAHQKLSELG 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi374g00036 246 MobiDBLite consensus disorder prediction 115 137 - -
Sebi374g00036 246 FunFam L-ascorbate peroxidase, cytosolic 132 239 - -
Sebi374g00036 246 ProSitePatterns Peroxidases proximal heme-ligand signature. 155 165 IPR019793 -
Sebi374g00036 246 SUPERFAMILY Heme-dependent peroxidases 5 246 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi374g00036 246 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 10 246 IPR044831 GO:0004601|GO:0034599
Sebi374g00036 246 ProSiteProfiles Plant heme peroxidase family profile. 74 246 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi374g00036 246 PRINTS Haem peroxidase superfamily signature 91 108 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi374g00036 246 PRINTS Haem peroxidase superfamily signature 179 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi374g00036 246 PRINTS Haem peroxidase superfamily signature 109 121 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi374g00036 246 PRINTS Haem peroxidase superfamily signature 33 47 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi374g00036 246 PRINTS Haem peroxidase superfamily signature 155 170 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi374g00036 246 Pfam Peroxidase 20 227 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi374g00036 246 ProSitePatterns Peroxidases active site signature. 33 44 IPR019794 GO:0004601
Sebi374g00036 246 FunFam Cytosolic ascorbate peroxidase 19 138 - -
Sebi374g00036 246 PRINTS Plant ascorbate peroxidase signature 149 170 IPR002207 GO:0004601|GO:0006979|GO:0020037
Sebi374g00036 246 PRINTS Plant ascorbate peroxidase signature 12 32 IPR002207 GO:0004601|GO:0006979|GO:0020037
Sebi374g00036 246 PRINTS Plant ascorbate peroxidase signature 171 195 IPR002207 GO:0004601|GO:0006979|GO:0020037
Sebi374g00036 246 PRINTS Plant ascorbate peroxidase signature 90 108 IPR002207 GO:0004601|GO:0006979|GO:0020037
Sebi374g00036 246 PRINTS Plant ascorbate peroxidase signature 109 121 IPR002207 GO:0004601|GO:0006979|GO:0020037
Sebi374g00036 246 PRINTS Plant ascorbate peroxidase signature 51 61 IPR002207 GO:0004601|GO:0006979|GO:0020037
Sebi374g00036 246 PRINTS Plant ascorbate peroxidase signature 65 89 IPR002207 GO:0004601|GO:0006979|GO:0020037
Sebi374g00036 246 PRINTS Plant ascorbate peroxidase signature 130 147 IPR002207 GO:0004601|GO:0006979|GO:0020037
Sebi374g00036 246 PRINTS Plant ascorbate peroxidase signature 197 222 IPR002207 GO:0004601|GO:0006979|GO:0020037
Sebi374g00036 246 PRINTS Plant ascorbate peroxidase signature 33 48 IPR002207 GO:0004601|GO:0006979|GO:0020037
Sebi374g00036 246 MobiDBLite consensus disorder prediction 113 137 - -
Sebi374g00036 246 Gene3D - 19 246 - -
Sebi374g00036 246 Gene3D Peroxidase, domain 2 132 239 - -
Sebi374g00036 246 CDD ascorbate_peroxidase 5 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi374g00036 Sebi-Chr374 923178 925118 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi374g00036 5 246 Peroxidase AT4G17690 29.930 5.98e-20 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi374g00036 K00434 - gmx:606508 454.521