Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi374g00029 ATGTTAGATCTTAATCTCAATGTGAACTCGACCGATTCGACTCAGAACGGCGACTCGTCGGTGCTTTTGGAGAAGCTTCATGAAGGTTCCTGGAACCAAATGGCGGAGTCAGGGACCTCGAATTCCTCCGTCGTCAATGCGGACGGGTCTAGCAACGGCGCAGGCGACGAGGACTCGTGCTCCACGCGCGCCGACGACGTGTTCACCTTCAATTTCGATATCCTTAAGGTGAAAGGCCCAAACGACGTCGTAACGAAGGAGTTGTTCCCGGTGAGTGGAGGAGCTAAAGGAGTGGATGAAGGCGGGTCCGGGAATTGGCAGTGGCAGGCTACGTCGTCGTTTCCGCCGAGGAATAATGGCTCGGTGGATCTCTCGTTCGATCGCCAGGGTGGGAACAGCGAGATGAAGATGGTTCAGCCTCAGCAACAACCGAAGAAGAGTAGAAGGGGACCAAGGTCTCGTAGCTCGCAATACAGAGGGGTCACCTTTTACAGAAGGACCGGAAGATGGGAATCGCATATCTGGTCTTTCAGTTGCTTTGATTATTACTGGGAAGGAAATATGTCTTTGGATTGCGGGAAACAAGTCTATTTGGGTGGATTTGACACAGCCCATGCTGCTGCTAGGGGAGTTGACGCTGACATCAATTTCAATCTGAGTGATTATGAGGATGATCTTAAACAGATGAAGAATTTATCCAAGGAGGAATTCGTGCACATACTCCGTCGCCAAAGTAATGGTTTCTCGAGGGGGAGCTCAAAATACCGAGGAGTAACACTCCACAAATGTGGCCGTTGGGAAGCTCGAATGGGACAATTCCTTGGCAAAAAGTATATATATCTTGGGTTATTCGACAGCGAAGTAGAAGCTGCAAGGGCTTATGACAAGGCAGCTATCAAATGCAATGGAAGGGAAGCAGTGACTAACTTCGAGCCAAGTACATACGAAGGAGAGATGAAATCTGCAGCCATTAATGAAGGTGGCAGTCAAAATCTCGACCTCAATTTGGGCATAGCAACCCCAAGACCTGGTCCCAAAGAAAATTGGGGGCAACTTCAGTTCTCCTCTGTCCCTTACAACATGCACGCTGGAAGAAGTTCAAGGATGGAAACCAATGTTAATTCAGGAATTGATAACCCATCTTTGAAAAGGCGGGTTGTTACTGAAGAGCGTCCTTCTGTATGGAATGACATGTGTCCTAGTTTCTTTCCCAATGAGGTGATTTCACTATCTAGTGTTTAG 1242 0.4839 MLDLNLNVNSTDSTQNGDSSVLLEKLHEGSWNQMAESGTSNSSVVNADGSSNGAGDEDSCSTRADDVFTFNFDILKVKGPNDVVTKELFPVSGGAKGVDEGGSGNWQWQATSSFPPRNNGSVDLSFDRQGGNSEMKMVQPQQQPKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWSFSCFDYYWEGNMSLDCGKQVYLGGFDTAHAAARGVDADINFNLSDYEDDLKQMKNLSKEEFVHILRRQSNGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARAYDKAAIKCNGREAVTNFEPSTYEGEMKSAAINEGGSQNLDLNLGIATPRPGPKENWGQLQFSSVPYNMHAGRSSRMETNVNSGIDNPSLKRRVVTEERPSVWNDMCPSFFPNEVISLSSV 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi374g00029 413 FunFam AP2-like ethylene-responsive transcription factor 253 313 - -
Sebi374g00029 413 SUPERFAMILY DNA-binding domain 253 312 IPR016177 GO:0003677
Sebi374g00029 413 Pfam AP2 domain 157 209 IPR001471 GO:0003700|GO:0006355
Sebi374g00029 413 Pfam AP2 domain 253 303 IPR001471 GO:0003700|GO:0006355
Sebi374g00029 413 MobiDBLite consensus disorder prediction 104 146 - -
Sebi374g00029 413 ProSiteProfiles AP2/ERF domain profile. 254 311 IPR001471 GO:0003700|GO:0006355
Sebi374g00029 413 Gene3D AP2/ERF domain 253 312 IPR036955 GO:0003700|GO:0006355
Sebi374g00029 413 Gene3D AP2/ERF domain 156 219 IPR036955 GO:0003700|GO:0006355
Sebi374g00029 413 ProSiteProfiles AP2/ERF domain profile. 157 213 IPR001471 GO:0003700|GO:0006355
Sebi374g00029 413 CDD AP2 157 220 IPR001471 GO:0003700|GO:0006355
Sebi374g00029 413 SMART rav1_2 157 224 IPR001471 GO:0003700|GO:0006355
Sebi374g00029 413 SMART rav1_2 254 317 IPR001471 GO:0003700|GO:0006355
Sebi374g00029 413 MobiDBLite consensus disorder prediction 95 158 - -
Sebi374g00029 413 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 119 342 - -
Sebi374g00029 413 SUPERFAMILY DNA-binding domain 156 214 IPR016177 GO:0003677
Sebi374g00029 413 PRINTS Ethylene responsive element binding protein signature 293 313 IPR001471 GO:0003700|GO:0006355
Sebi374g00029 413 PRINTS Ethylene responsive element binding protein signature 255 266 IPR001471 GO:0003700|GO:0006355
Sebi374g00029 413 MobiDBLite consensus disorder prediction 33 58 - -
Sebi374g00029 413 CDD AP2 253 313 IPR001471 GO:0003700|GO:0006355
Sebi374g00029 413 MobiDBLite consensus disorder prediction 33 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi374g00029 Sebi-Chr374 770728 773318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi374g00029 73 337 AP2-EREBP Transcription Factor Family AT4G36920 58.741 3.99e-90 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Sebi374g00029 AP2 7.5e-05 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi374g00029 K09284 - gmx:100788303 582.022