Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi374g00016 ATGCCATTGCAGTATTTTCTATATCAACTCCTGAGAGGTTTGAAGTACATACACTCTGCCAACGTTTTGCACCGAGATCTAAAACCAAGCAATTTACTTCTCAATGCAAACTGTGATCTCAAAATATGTGACTTTGGGCTTGCCAGAACAACCTCTGAGACAGACTTTATGACAGAATATGTTGTGACTCGTTGGTACAGAGCCCCTGAATTGCTACTGAATTGTTCAGAATATACTGCAGCTATTGATATATGGTCTGTTGGTTGCATTTTGATGGAGATAATTAGAAGGGAGCCTTTATTTCCTGGTAAAGATTATGTTCAGCAGTTGGCTCTCATAACTGAGTTACTAGGTTCACCAAATGACTCAGATCTTGGATTCCTTAGAAGTGATAATGCAAAGAAATATGTTAAGCAGCTCCCACATGTAGAAAAACAGCCCTTTTCACAGCGGTATCCTGATGTATCCCCGTTGGCAATTGATCTTGCTGAGAAAATGTTGGTTTTTGATCCCTCCAAACGCATAACTGTCGAGGAAGCACTGAATCACCCATATATGTCAAGTCTTCATGAGATCAACGAGGAGCCCACTTGTCCAACTCCTTTTGTCTTTGATTTCGAACAGACAATTCTGAATGAAGAAGATATAAAGGAACTCATATGGAGGGAGTCTCTGAACTTCTGCCAGGATCAGATGCTGGAATAG 705 0.4057 MPLQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILMEIIRREPLFPGKDYVQQLALITELLGSPNDSDLGFLRSDNAKKYVKQLPHVEKQPFSQRYPDVSPLAIDLAEKMLVFDPSKRITVEEALNHPYMSSLHEINEEPTCPTPFVFDFEQTILNEEDIKELIWRESLNFCQDQMLE 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi374g00016 234 SUPERFAMILY Protein kinase-like (PK-like) 4 192 IPR011009 -
Sebi374g00016 234 Gene3D Phosphorylase Kinase; domain 1 214 223 - -
Sebi374g00016 234 ProSitePatterns Serine/Threonine protein kinases active-site signature. 22 34 IPR008271 GO:0004672|GO:0006468
Sebi374g00016 234 FunFam Mitogen-activated protein kinase 2 213 - -
Sebi374g00016 234 ProSiteProfiles Protein kinase domain profile. 1 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi374g00016 234 SMART serkin_6 1 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi374g00016 234 Pfam Protein kinase domain 5 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi374g00016 234 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 3 187 - -
Sebi374g00016 234 Gene3D Transferase(Phosphotransferase) domain 1 3 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi374g00016 Sebi-Chr374 525240 526156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi374g00016 4 227 MAP Kinase Gene Family AT1G07880 83.036 5.04e-144 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Sebi374g00016 Pkinase 3.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi374g00016 K04371 - gmx:100802929 454.907