Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi372g00030 ATGGCAGAACGCGTTGTAGGAACTGGATCATTTGGAATTGTTTTCCAGATTTTCAGGGGGTTGGCTTATATCCACACCGTTCCTGGCGTTTGCCACAGAGATTTGAAGCCTCAAACTATACTGGTTGATCCTCTTACACACCAAGTTAAGCTGTGTGATTTTGGAAGTGCAAAAGTGCTAGAACTAGCTCACAGACAACAATTCTACTTCTGGAAGAACTATAGGAATAATCGGCCGAAGCAGATTTTACCAAGATCACTTCCTGAACCTGGTGCAACTCCTGCACCCCCTGCTCCTACTTCAACTCCAGCTTAG 315 0.4508 MAERVVGTGSFGIVFQIFRGLAYIHTVPGVCHRDLKPQTILVDPLTHQVKLCDFGSAKVLELAHRQQFYFWKNYRNNRPKQILPRSLPEPGATPAPPAPTSTPA 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi372g00030 104 SUPERFAMILY Protein kinase-like (PK-like) 13 63 IPR011009 -
Sebi372g00030 104 MobiDBLite consensus disorder prediction 81 104 - -
Sebi372g00030 104 ProSiteProfiles Protein kinase domain profile. 1 104 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi372g00030 104 Pfam Protein kinase domain 13 75 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi372g00030 104 Gene3D Transferase(Phosphotransferase) domain 1 9 85 - -
Sebi372g00030 104 MobiDBLite consensus disorder prediction 89 104 - -
Sebi372g00030 104 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 15 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi372g00030 Sebi-Chr372 934563 935930 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi372g00030 14 58 Core Cell Cycle Gene Families AT3G48750 53.333 7.04e-10 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Sebi372g00030 Pkinase 1.7e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi372g00030 K14502 - mus:103997086 97.0561