Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi372g00022 ACGGACAAGACTTCTATACTTCGCGAAGCTATCAGTTATATGAAAGAACTTCAAGAACGTGTGACGGAGCTTGAACAGCGAAACAAGAGAGGCAAAGAATCAAAGGTAATCCTGAAGAAGACTAATGATCATCTGTGTGCAAATGAAGACACGACTTCAAGTGAAACAAATTCTGATGAGGATTGCTGTAGACGACCCAGCGGATTGCTCCCTGATGTTGAAGCAAGAGTGTTGGAGAATGAAGTACTCATTGAGATCCACTGTGAGAAGGAAAATGGCATTCAGCTCAAGATATTGGAGTTGCTTGAAAATCTTCATCTCTATGTCACTGGCAGCAGTGTGTTGCAGTTTGGGAATTCAACTCTTGGCATTACTATCATCGCTCAGGTGCTAAGAGATTAA 402 0.4204 TDKTSILREAISYMKELQERVTELEQRNKRGKESKVILKKTNDHLCANEDTTSSETNSDEDCCRRPSGLLPDVEARVLENEVLIEIHCEKENGIQLKILELLENLHLYVTGSSVLQFGNSTLGITIIAQVLRD 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi372g00022 133 Coils Coil 7 34 - -
Sebi372g00022 133 Gene3D - 1 50 IPR036638 GO:0046983
Sebi372g00022 133 PANTHER BHLH TRANSCRIPTION FACTOR 1 130 - -
Sebi372g00022 133 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 2 33 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi372g00022 Sebi-Chr372 740688 741487 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi372g00022 2 129 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 44.697 4.99e-21 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi372g00022 - - aprc:113856039 177.178