Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi372g00020 ATGGAGGATTGGTGGGAGTATTGGTTCGCTGATTTGGATATGGACGGGGATGACTCCTTCAATCAATGCCAAATGAATGGTTTTTTGAACATTGATGATGAAGAGCATCAGCAAGTAAACTTGTCTTGTAGAACTGAAACACAATCTCATCACTCTCTGCAGTACTACCCTTCTTGCTTAGGCTTCAAGGGCCAGTCGAATGTAGTTTGCTGGGGGGGACCATCGCTAGAGGAATTAGGCCATTCTTCCTCAAAAAGGACCCTAAGCTTTGAACCCATCAGTGTGACCCAAGGCCAAGGAAGAAAGAGGGGTAGAAGCTCTTCAGAGATACAGGATCACATAATGGCTGAGAGAAAAAGGAGGCAGGAAATGGCAGAGAGATTCATAACACTTTCAGCTATTATACCTGGCTTGAAGAAGATAGACAAGGCCTCTGTTCTTCGGGAAGCTATTAATTACGTGAAACAACTTCAAGAACGCATTGCAGTGCTGGAAGAAGAAAGCAAGCAAAAAAGTACGACGTCAATAATCTCTATTAAGAAATCTCACTCTCATCCACTTTCCGAAACAAACTCCTTTGGTTCCAACAATCAAGTGCTCCCTCAAGTTGAAGCAATAGGCTTAGAGCCTGCAGAGAAACAACTACTTATTAGAGTCCATTGTGAGAAACGAAATGGCATCTTGCTCAAAATATTGGCCCTACTTGAAAAAATACACCTCTCTGTTGCCAGTAGCAGTGTACTGCCATTTGGGAAAAATACTCTCAGCGTTACCATTATTGCTCAGAAGGGTGAGGAATATAACATGACAGGAGAAGAATTGGTAAAAAGCTTGAGACTGGGTCTTCTCGAAGTATATGACATGCACATGTGA 873 0.4261 MEDWWEYWFADLDMDGDDSFNQCQMNGFLNIDDEEHQQVNLSCRTETQSHHSLQYYPSCLGFKGQSNVVCWGGPSLEELGHSSSKRTLSFEPISVTQGQGRKRGRSSSEIQDHIMAERKRRQEMAERFITLSAIIPGLKKIDKASVLREAINYVKQLQERIAVLEEESKQKSTTSIISIKKSHSHPLSETNSFGSNNQVLPQVEAIGLEPAEKQLLIRVHCEKRNGILLKILALLEKIHLSVASSSVLPFGKNTLSVTIIAQKGEEYNMTGEELVKSLRLGLLEVYDMHM 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi372g00020 290 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 108 157 IPR011598 GO:0046983
Sebi372g00020 290 PANTHER BHLH TRANSCRIPTION FACTOR 81 283 - -
Sebi372g00020 290 SMART finulus 114 163 IPR011598 GO:0046983
Sebi372g00020 290 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 113 173 IPR036638 GO:0046983
Sebi372g00020 290 Gene3D - 107 178 IPR036638 GO:0046983
Sebi372g00020 290 Coils Coil 147 174 - -
Sebi372g00020 290 Pfam Helix-loop-helix DNA-binding domain 112 158 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi372g00020 Sebi-Chr372 609084 613035 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi372g00020 99 282 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 43.299 4.24e-44 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sebi372g00020 HLH 7.5e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi372g00020 - - cam:101501845 233.802