Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi372g00011 ATGGAGACCTCATCAAGCGTTACCGCGTTGGTCGTCCTCGCTGCCAGCATCGTGGGTCGCACCTTCTTCACTATTCAACTGTTTGATTTTGGTCTTGCAATAACTAATGGGTCCCAAGACAAAAACATTAAGCTTTCAGGCGCATTGGGGTACGTAGTCCCGGAGTATCTTCTAGATGGTAAATTGACGAATAAAAGTGATGTATATGCTTTTGGGGTTGTGCTTCTAGAGCTCCTATTAGGAATTAAGCCAGTGGAAAAACTTGCATCTGCTCAGTGTCAATCCATTGTCACACAGGCCATGCTGCATCTCACAGTAGGCCTAAATCCTGAATATGACCAGGTCCGAATCCAAATCCTGGGAAAAGAGAAATTCCCAGGACTTAATGAAGTGATAGCCATTATCTGGAGTGAAGAAAGCAGGAGAGAAATGATGCTAGAGACCCTAACTACTGAAAGCTCAGCAATGATAGCTGAAGGAGGAACAACCATGGTTGCTAACCAGAAGAAAAGCGGGTTTCCCAATATGGAGAAAAACATGAGGAGGCCCGATGTACCTACTGCAACAAGCCACATCATACGAGGGAGAAGTGCTGGAAATTACATGGAAAACCCCAAGCCAAGAATGGGGGCAGAAAAGAGTAAATTGGAGAAACCCACAGATACACCCTTTACCCACTACTGGATACTAGATTCTAGAGCCACTGACCATATGATCCCTCTACCCAAATACTTCTCCACATATTTTTCATCTTCTGAAGAAAGCAATGAGGATGGAGAAGATATCTCTCATAGCCAAAGGTCAAAAAGGAAGAAAGTGGAGCTTAAGACCTTTAGTAGAAAGAGAAAAAGAGCAGAGATGAAGGATGTGAACTCTATAGAAGAAGCATGA 891 0.4366 METSSSVTALVVLAASIVGRTFFTIQLFDFGLAITNGSQDKNIKLSGALGYVVPEYLLDGKLTNKSDVYAFGVVLLELLLGIKPVEKLASAQCQSIVTQAMLHLTVGLNPEYDQVRIQILGKEKFPGLNEVIAIIWSEESRREMMLETLTTESSAMIAEGGTTMVANQKKSGFPNMEKNMRRPDVPTATSHIIRGRSAGNYMENPKPRMGAEKSKLEKPTDTPFTHYWILDSRATDHMIPLPKYFSTYFSSSEESNEDGEDISHSQRSKRKKVELKTFSRKRKRAEMKDVNSIEEA 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi372g00011 296 MobiDBLite consensus disorder prediction 198 218 - -
Sebi372g00011 296 Gene3D Transferase(Phosphotransferase) domain 1 12 185 - -
Sebi372g00011 296 ProSiteProfiles Protein kinase domain profile. 1 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi372g00011 296 MobiDBLite consensus disorder prediction 279 296 - -
Sebi372g00011 296 Pfam Protein kinase domain 25 101 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi372g00011 296 SUPERFAMILY Protein kinase-like (PK-like) 23 102 IPR011009 -
Sebi372g00011 296 MobiDBLite consensus disorder prediction 252 296 - -
Sebi372g00011 296 PANTHER OS01G0750732 PROTEIN 23 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi372g00011 Sebi-Chr372 469706 472587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi372g00011 12 172 Trihelix Transcription Factor Family AT1G70460 32.544 1.33e-15 75.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Sebi372g00011 Pkinase 5e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi372g00011 - - cam:105852603 200.675