Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi370g00046 ATGTTCGGTGGTGGAGGAGACGATGCACTGGCGGCTCGCCTCGGCATGGTGCCGCCGTCAATGCTGAATCCTGCGACATCGTCGGTGATCTCTGGCGAGTTGTCACCGGCGCCGGCGAGGGAGGAGAGGGGCCCGACTCAGCCGCAGTGGAGCCAGCAGGAGACGAGAGAGTTCATAGCGATCCGCGCGGAGCTGGAGAGAGACTTCACTGCGTCGAAGAGGAACAAGACGCTTTGGGAGGTGGTGAGCTCCAAGATGAAGGAGAGAGGGTTCAGGAGGAGCCCCGAACAATGCAAATGCAAGTGGAAGAACCTCGTTAATCGCTATAAGGGAAAAGAGACATCTGATCCTGAGCATGGCAAGCAATGCCCGTTTTTTGAAGAATTGCATGCAGTCTTTACCCAAAGGGCACATAACATGCAACGGTTGCTTCTTGAATCTGAAACCCGTTCAACTCAAACAAAGAAAGGGGGAAATGCTCAAGGAGTTTTTCCAACACCAGCTAAGGATGGAGATGCAGTGGAGGGAGATGATGGAAAGGCGTGCTCATGA 552 0.5417 MFGGGGDDALAARLGMVPPSMLNPATSSVISGELSPAPAREERGPTQPQWSQQETREFIAIRAELERDFTASKRNKTLWEVVSSKMKERGFRRSPEQCKCKWKNLVNRYKGKETSDPEHGKQCPFFEELHAVFTQRAHNMQRLLLESETRSTQTKKGGNAQGVFPTPAKDGDAVEGDDGKACS 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi370g00046 183 MobiDBLite consensus disorder prediction 146 160 - -
Sebi370g00046 183 CDD GT1 48 113 - -
Sebi370g00046 183 FunFam Zinc finger and SCAN domain-containing 20 50 111 - -
Sebi370g00046 183 Pfam Myb/SANT-like DNA-binding domain 48 131 IPR044822 -
Sebi370g00046 183 SMART sant 46 108 IPR001005 -
Sebi370g00046 183 MobiDBLite consensus disorder prediction 146 183 - -
Sebi370g00046 183 ProSiteProfiles Myb-like domain profile. 50 106 IPR001005 -
Sebi370g00046 183 PANTHER FI21293P1 42 151 - -
Sebi370g00046 183 MobiDBLite consensus disorder prediction 21 54 - -
Sebi370g00046 183 Gene3D - 50 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi370g00046 Sebi-Chr370 638918 640792 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi370g00046 44 144 Trihelix Transcription Factor Family AT2G38250 54.902 3.15e-33 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Sebi370g00046 Myb_DNA-bind_4 6.7e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi370g00046 - - gmx:100812635 287.345