Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi370g00041 ATGAAACAGCCATCCAAACCATGGAGGCCCTTCACATCAAACTGCTGCTCAACTGAAGACCAAACCATCTTTAGAAACTTCAGTAGATGCAAGACCTCACGTTCAGATTTCTCCAAAAACATTGCTCCTTTACCATCATTTAGGAGGCTCTCGTTCTCTGATCTTAGCCGTTCCTCATCCACAAGAATCAATGAGGATCTTGCACAGTCTTTTGGTGCGGATTTGTTTGATTTTCAGCTGAGTGAGTTGCGTGCCATCACCCAGAATTTTTCAAGCAATTTCTTGCTGGGTGAAGGTGGGTTTGGAACAGTGCATAAGGGTTACATAGATGATAACTTGAGACTAGGCTTGAAGGCACAACCTGTTGCTGTCAAGCTTTTGGACATTGAAGGCTTACAAGGACACCGTGAATGGCTTGCAGAAGTGATTTTTCTTGGGCAGCTAAGACACCCCAATTTGGTTAAGTTGATTGGGTATTGTTGTGAAGATGAAGAACGGCTACTTGTCTACGAATTCATGCCACGAGGAAGCTTAGAGAATCACTTGTTCAGAAGGCTAACATCACTGCCTTGGGGAACAAGATTAAGAATTGCAATAGGTGCTGCTAAAGGCCTTTCCTTCTTGCATGGAGCTGAAAAACCAGTCATTTACAGGGACTTCAAGACCTCCAATGTCTTGCTTGATTCAGACTTCACAGCAAAATTGTCAGATTTTGGACTTGCAAAAATGGGGCCAGAGGGATCAAAGTCACACGTTACAACCAGAGTTATGGGCACTTATGGATATGCAGCCCCAGAATACATCTCAACAGGCCAAGGATGGCAACAATTGTGGAAACTCTTGAAAGCCTGCAACAGTTCACAGACATGGCAGTTACCAGTGGACACTGGCCAGCATCAACAAAATCTACTAGAAATGGAGCCTCCAACAATAAGTGCCATACCAGCTCTTTTCCTTCTCCGCACCTCCACCACCACTTCCATATGCACCAACCTTACCAAGGCCTGGTCAGGTGATCTTCTTTCAGCTGAGTTTGCATGGAATCGCCTCCCATTTTTTGAAGACAAGCCTTCACCCATAGCTCTCAAAATTGCTGTCTTCTCTAGAAAATGGCCTATTGGGACCACTCCTGGTGGCATGGAACGCCATGCCCACACCCTTCACACTGCTTTAGCACACCGTGGCCATCAAGTTCATATCTTTACCTCCCCCCCACAAGATGAAAGCAGTTCAATCTCATCTCTAGAGATAAACAATCATCAAGCAGGTGCACCCTCTTCACCTTTCATCCATTGTCATGAAGGGGAGCCTGGTAGGTGGCGCTACAACAAAGCATGGGAACAGTTTTTGGAAGAAAACCAGCGTGAACCGTTTGATGTTGTTCACTCAGAAAGTGTGGCACTTCCTCACTGGCTTGCACGCAACCTTTCAAATCTTGCAGTCTCTTGGCATGGCATAGCACTTGAGAGCTTGCAATCACGCATTTTTCAGGACTTGGCTCGTAGCCATGATGAGCCTAGATCCCCTGATTTTGACAAAGGTTTAGAAGGGGTTATCCCAAAGGTGCTGAATGAGATAAGGTTCTTCAGGAATTATGCCCATCATATTGCTATCAGTGATAGTTGTGGTGAGATGCTAAGGGATGTGTACCAAATTCCCAGCAGAAGAGTTCATGTAATTCTCAATGGTGTTGATGAGGATGACTTCAGAGAAGATGTAGAATTGGGAAAAGAATTTAGAGCCAAAATTGGCATTCCAAGCAATGCAAGTTTAGTACTTGGTGTAGCAGGAAGATTAGTGAAAGACAAAGGCCATCCACTGCTTCATGAAGCATACTCCAGGCTAATAACCAAGCACTCCAATGTGTACTTGATTGTAGCTGGCTCTGGACCATGGGAGAACAGGTACAACGACTTAGGGAGCCAAGTTATTGTTCTTGGATCTATGAGTCCTTCCATGCTGAGAGCATTCTATAATGCAATTGACATTTTTGTAAATCCTACACTAAGACCACAAGGGCTTGATCTTACTCTCATGGAGGCCATGATGAGTGGGAAGCCCCTTTTGGCATCAAGGTTTCCTAGCATCAAAGGTAGTATTGTGGTTGATGATGAATTTGGCTACATGTTCTCTCCCAACGTGGAGTCCCTGTTGGAGGCACTCGAAGAAGTGGTAAAGGAAGGCCAAGATAGGCTAGCAAGGAGAGGAAAGGCATGCCGTGAATATGCAAGCTCCATGTTTACAGCAAGAAAGATGGCATTAGCATATGAGAGGCTATTCCTATGCATAAAAAGGGATACATTTTGTACCTATCCTTGA 2319 0.448 MKQPSKPWRPFTSNCCSTEDQTIFRNFSRCKTSRSDFSKNIAPLPSFRRLSFSDLSRSSSTRINEDLAQSFGADLFDFQLSELRAITQNFSSNFLLGEGGFGTVHKGYIDDNLRLGLKAQPVAVKLLDIEGLQGHREWLAEVIFLGQLRHPNLVKLIGYCCEDEERLLVYEFMPRGSLENHLFRRLTSLPWGTRLRIAIGAAKGLSFLHGAEKPVIYRDFKTSNVLLDSDFTAKLSDFGLAKMGPEGSKSHVTTRVMGTYGYAAPEYISTGQGWQQLWKLLKACNSSQTWQLPVDTGQHQQNLLEMEPPTISAIPALFLLRTSTTTSICTNLTKAWSGDLLSAEFAWNRLPFFEDKPSPIALKIAVFSRKWPIGTTPGGMERHAHTLHTALAHRGHQVHIFTSPPQDESSSISSLEINNHQAGAPSSPFIHCHEGEPGRWRYNKAWEQFLEENQREPFDVVHSESVALPHWLARNLSNLAVSWHGIALESLQSRIFQDLARSHDEPRSPDFDKGLEGVIPKVLNEIRFFRNYAHHIAISDSCGEMLRDVYQIPSRRVHVILNGVDEDDFREDVELGKEFRAKIGIPSNASLVLGVAGRLVKDKGHPLLHEAYSRLITKHSNVYLIVAGSGPWENRYNDLGSQVIVLGSMSPSMLRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPLLASRFPSIKGSIVVDDEFGYMFSPNVESLLEALEEVVKEGQDRLARRGKACREYASSMFTARKMALAYERLFLCIKRDTFCTYP 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi370g00041 772 Gene3D Transferase(Phosphotransferase) domain 1 173 287 - -
Sebi370g00041 772 PANTHER GLYCOSYLTRANSFERASE 316 772 - -
Sebi370g00041 772 ProSitePatterns Protein kinases ATP-binding region signature. 96 125 IPR017441 GO:0005524
Sebi370g00041 772 ProSiteProfiles Protein kinase domain profile. 90 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi370g00041 772 SUPERFAMILY Protein kinase-like (PK-like) 73 272 IPR011009 -
Sebi370g00041 772 Gene3D Phosphorylase Kinase; domain 1 52 172 - -
Sebi370g00041 772 FunFam Serine/threonine-protein kinase BIK1 56 172 - -
Sebi370g00041 772 Pfam Protein tyrosine and serine/threonine kinase 96 271 IPR001245 GO:0004672|GO:0006468
Sebi370g00041 772 Gene3D Glycogen Phosphorylase B; 573 743 - -
Sebi370g00041 772 Pfam Glycosyl transferases group 1 591 736 IPR001296 GO:0016757
Sebi370g00041 772 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 363 760 - -
Sebi370g00041 772 CDD GT4_PimA-like 363 760 - -
Sebi370g00041 772 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Sebi370g00041 772 Gene3D Glycogen Phosphorylase B; 362 572 - -
Sebi370g00041 772 Pfam Glycosyltransferase Family 4 378 567 IPR028098 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi370g00041 Sebi-Chr370 581036 586689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi370g00041 314 772 Glycosyltransferase AT4G19460 64.894 0.0 625
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Sebi370g00041 Glyco_transf_4 4.5e-21 CL0113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi370g00041 - - aprc:113860121 776.548