Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi370g00039 ATGTCAGACATTCTCAAAGAAGTTGCAGCCCAAGAGTATGGGAAATTTGAAGTCAATTTCAGTAGGAAAAGTGTTGTAAAAGCAGCCAACCCTTTACCAAAGCCATTTTCTATCACTCTCACAAATCTTGATCTGCTTTCAGGCCGTTTTCCTGTTACATACTTGTATTTCTACCGCAGACCAAAACTAGGTAACTTTAATGCTTTTGTTGAGGCTCTTAAGAGCTCTCTAGCACAAATTCTTAGTTACTACTACCCCTTTTCTGGCCAAATTGTTCAAAATCCCAAAACTAGTGAACCTGAGATCATTTGTGACAACAATGGTGCTCTAGTCATTGAAGCAAACTTAAATACCCCACTAAAGAATTTAGATTTTTATAATCTCAATGAAACCCTTCAAGAAAAGATAGTCTCAGTTCAACCAGATTTCCCTTTGCAAATTCAGGTAACAGAATTCACTTGTGGTGGCATATCTATAGCATTTACTTTTGACCATGCATTAGGTGATGCAAGTTCCTTTGGTAAATTTATTGCCTCATGGTGTGAAATAGCTCAAAATAAGCCACTGTCATGCTTACCAGACCATAGTAGACACCTTTGTGCACGTTCCCCTCCCAAATATCAACCATCCTTGGACCAAACTTTCATCAAATGCACCATGGAAGAGATACAAAACATGCAAATGAACCGCATCTCACTTAAACGCCTTTATCATATCAATGCATCAAGTATCAACATGCTGCAGAGGCTTGCTTCTGTTAATGGCACTAAGAGAACAAAGATTGAGGCTTTCTCTGCCTATGTATGGAGGATAATGATTGGCACAATTGATCAAAGCCATAAAAAGTGCAAGATGGGTTGGTTAGTGGATGGAAGAGAGAGAATGGGTAGAGGTAAGAATTCCATGTCAAATTACATTGGTAATGTCCTGTCTTTGGCTTTTGCTGAGGCAAGCATTCAAGAATTGAAGGAAGCCTCATTATCAGACACTGGTAACATAGTGCATGAGGCAATTTCAAAGGTTAGCAATGAGGCTCATTTTTTGGATTTGATTGATTGGATTGAGAGTCATAGGCCTGGTTTGATGCTAGCAAAGGCAGTATTGGGTCAGGATGGGCCAGCACTGGTGGTGTCCTCTGGACAAAGGTTTCCTGTCACTGAAGTGGACTTTGGATTTGGGAGTCCTTTGTTAGGGACAGTGTACACTTCCATTGAAGGCGTAGGAGTTGGTTACATGAACCAAAGGCCTAGTGCTAATGGTGATGGTTCATGGACTGTGTCTGCTATATTGTGGCCTGAACTGGCAGCTGCACTGAAGGATGACCCAATTTTCCAGCCCATGACTGCTTCTCATCTTCAACTCTAG 1365 0.4103 MSDILKEVAAQEYGKFEVNFSRKSVVKAANPLPKPFSITLTNLDLLSGRFPVTYLYFYRRPKLGNFNAFVEALKSSLAQILSYYYPFSGQIVQNPKTSEPEIICDNNGALVIEANLNTPLKNLDFYNLNETLQEKIVSVQPDFPLQIQVTEFTCGGISIAFTFDHALGDASSFGKFIASWCEIAQNKPLSCLPDHSRHLCARSPPKYQPSLDQTFIKCTMEEIQNMQMNRISLKRLYHINASSINMLQRLASVNGTKRTKIEAFSAYVWRIMIGTIDQSHKKCKMGWLVDGRERMGRGKNSMSNYIGNVLSLAFAEASIQELKEASLSDTGNIVHEAISKVSNEAHFLDLIDWIESHRPGLMLAKAVLGQDGPALVVSSGQRFPVTEVDFGFGSPLLGTVYTSIEGVGVGYMNQRPSANGDGSWTVSAILWPELAAALKDDPIFQPMTASHLQL 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi370g00039 454 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 35 403 - -
Sebi370g00039 454 Gene3D - 12 214 IPR023213 -
Sebi370g00039 454 Gene3D - 217 440 IPR023213 -
Sebi370g00039 454 Pfam Transferase family 17 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi370g00039 Sebi-Chr370 560682 562046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi370g00039 17 433 Monolignol Biosynthesis Gene Families AT5G48930 25.513 1.37e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi370g00039 - - gmx:100795616 759.985