Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi370g00031 ATGACGAAAAGAAACAAGAAACCATCTTCTAATTCACCAACAATTGATCAACTAGCTAAGGTTTCGTATCAAAACCTACACAATGGAACGAATGGGTTCTCAGTTAGAAACTTGATTGGATCAGGAAGTTTTGGCTCTGTCTACAAAGGAACACTTGAGTCAGAAGATAGAGTTGTTGCAATAAAAGTCCTAAACCTTCAAAAGAAAGGAGCTCACAAGAGTTTCATTGCTGAATGTAATGCACTCAAAAACATTAGACACCGAAATCTGGTTAGGATTCTGACATGTTGTTCCAGTACAGATTACAAAGGTCAAGAATTTAAAGCTCTAGTTTTTGAGTACATGAAAAATGGAAGCTTAGAAAGTTGGTTGCATCCCACAACAGAAAATACAGATCAGTCCAAATCATTGAACCTTGAACAAAGATTTAATATTATAGTCGATGTTGCTTCAACAATTCATTATCTTCACTATGAATGTGGGGAGCCTGTCATTCATTGTGATTTAAAGCCTAGCAATGTTCTTCTTGATGAATGCATGGTGGCACACGTGAGTGATTTTGGCTTAGCAAGATTGCTCTCAAGTGTTGGAGTTTCTCTGATGCAAAGTAGCACAATTGGAATAAAGGGTACGGTTGGTTACACGCCTCCAGAGTATGGAATGGGTTCTGAGGTGTCAATTGAGGGTGACATTTATAGCTTTGGCATTCTAGTTTTAGAGATGTTAACCGGAAGGAGACCCACAGATGAGCTGTTTGAAGATGGCCATAATATCCATAATCATGTTAAACTTTCAATTCCAAATCAACTTTTGCAGATTGTGGACCCGTCCATTCTCCCCAATGGATTAAAACGAGATATTGACTATGGGAACCTTGGCATTATGCATCCTAATGTGGAGAAATGTTTACTTTCACTCTTTAGGATTGCGCTCACTTGTTCAGTGGAATCACCAAAAGAAAGAATGAGTATGGTTGATGTCACGAGGGAGCTTAATATAATTAAAAGTTTCTTTCTTCCTGGGGTTTAA 1029 0.381 MTKRNKKPSSNSPTIDQLAKVSYQNLHNGTNGFSVRNLIGSGSFGSVYKGTLESEDRVVAIKVLNLQKKGAHKSFIAECNALKNIRHRNLVRILTCCSSTDYKGQEFKALVFEYMKNGSLESWLHPTTENTDQSKSLNLEQRFNIIVDVASTIHYLHYECGEPVIHCDLKPSNVLLDECMVAHVSDFGLARLLSSVGVSLMQSSTIGIKGTVGYTPPEYGMGSEVSIEGDIYSFGILVLEMLTGRRPTDELFEDGHNIHNHVKLSIPNQLLQIVDPSILPNGLKRDIDYGNLGIMHPNVEKCLLSLFRIALTCSVESPKERMSMVDVTRELNIIKSFFLPGV 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi370g00031 342 Gene3D Phosphorylase Kinase; domain 1 1 114 - -
Sebi370g00031 342 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 11 335 - -
Sebi370g00031 342 CDD STKc_IRAK 39 334 - -
Sebi370g00031 342 ProSitePatterns Protein kinases ATP-binding region signature. 39 62 IPR017441 GO:0005524
Sebi370g00031 342 SUPERFAMILY Protein kinase-like (PK-like) 6 332 IPR011009 -
Sebi370g00031 342 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Sebi370g00031 342 SMART serkin_6 33 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi370g00031 342 Gene3D Transferase(Phosphotransferase) domain 1 115 337 - -
Sebi370g00031 342 ProSiteProfiles Protein kinase domain profile. 33 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi370g00031 342 FunFam LRR receptor-like serine/threonine-protein kinase EFR 3 114 - -
Sebi370g00031 342 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 115 340 - -
Sebi370g00031 342 Pfam Protein kinase domain 35 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi370g00031 Sebi-Chr370 470570 471745 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi370g00031 1 339 Receptor kinase-like Gene Family AT3G47570 51.009 1.10e-112 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Sebi370g00031 Pkinase 3.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi370g00031 - - gmx:100792724 561.992