Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi370g00030 ATGACTGCTCGCAGGCTGAAGAAGAAATCAGCAATCACTTTTGAATTTCTGAGACATTTTACTTTCCATGAAATCCAACAAGCAACCAATGATTTTGATCCTAATCTGCTTATTGGAGAAGGAGGATTTGGCAAGAGCCATGTGACAACCAATGTAAAGGGTAGCTTCGGGTATGTTGATCCTGAGTATTTTAGAACCAAGTATCTTACTAAGAAATCAGATGTTTACTCTTTTGGGGTGGTGTTGATTGAAGTTATCTGTGGCAAGCCTGCTTTAGATGATGCTCGTCCAACTCAGCAAATGAATTTGGCATTGTGGGCATTAAGCTGTCATGGAAAGGGGACTTTCTATGAAATGATGGATCCATATTTGAGTGGAAAAGTGAATATGGATTCTCTGAAAAAGGTCTCTGAGTTGGCTTGGAAGTGCTTGGAGGAGCGTCGGGTGAACAGGCCACCAATGGGGGTTGATTCCAACTACCTTTTGGATGCTTCAGAAGATGCAAGTTTTAGACTTGGGTGGAAACCAGCTATCAGGAATGATACGGACCTTTATAGGAAATCTCAGTCAATTATTTATTTGGATTTATCACAAAATATGTTAGAAGGAAATATTCCTCCAAACATAGGAAACTGCCATAAGTTACAATACCTATGCCTTTCACAAAACAGACTCAAAGGAACCATACCCTTTGAGGTTTTTAGCCTTTTCTCATTAACAAACTTACTCGACTTGTCACAAAACTCATTGAGTGGTAGCATACCAAAAGAATTGGGTATGCTGAAAAATATTGATGAGCTAGATGTCTCTGAAAATCACTTGTCTGGTGATATTCCTAGAACCATAGGAGAATGCATAAGCTTAGAGTACCTTCATTTGCAAGGAAACTCCTTCCATGGAATCATACCATCCTCCTTGGCTTCTCTCAAAGGTCTTCAATATTTAGACCTGTCAAGAAATTTATTGTCTGGACCAATTCCTGATGTTCTGCAGAATATTTCTACTTTAAAACACTTGACTGTTTCTTTTAACATGTTGGATGGTGAGGTACCAACAAAAGGTGTCTTTGGAAATGCAAGTGAGTTAGCTGTGACTGGAAACAACAAGCTTTGTGGAGACTACAAAGGTCAAGAATTTAAAGCTCTAGTTTTTGATTATATGAAAAATGGAAGCTTAGAACAATGGCTGCATCCAGGGAAAGTAGATTTTGAGCATCCAAGAACGTTGGACCTTTATCAAAGATTAAATATCATTAATGATGTTGCTTCTGCATTACATTATCTTCATCATGAATGTGAGCAACCGATCCTTCATTGTGATTTAAAGCCAAGCAATGTCCTTCTTGATGATGACATGGTTGCTCATGTGAGTGATTTTGGCATAGCAAGACTTGTCTCAACCATTGATGGTACCTTTCATAAGCAAACTAGTACAATTGGAATAAAGGGGACTGTTGGTTACACTCCTCCAGAATATGGAGCTGGTTCTGAGGTGTCTGCTTATGGTGACATGTATAGCTTTGGGATTCTTATGTTGGAAATGCTTACCGGAAGAAGACCAACTGATAAAATGTTTGAAGATGATCAAAATCTTCATAACTTTGTTGAAATTTCCCTTCCTGATAATCTTTTGCAGATTTTGGACCCACAACTTGTTCCAAGAGATGAAGAAGATGAATTGGAAGAAGAAAACAATGGGAATTTTAGTCCAAATGTTGAGAAGTGCTTAGTTTCACTTTTTAGGATAGGACTTGCTTGTTCTATGGAATCACCAAAAGAAAGAATGAGTGTGGCTGATGTAACTAGGGAACTCAACCTAGTCAGAAAGGCATTTCTTGGTGGAGTTGACACTAGAGAGGAAATAAAGGGGAAATCAAATGACATGGTCATTTTGGAAACAGATGTGTATGCAGTATGA 1917 0.3839 MTARRLKKKSAITFEFLRHFTFHEIQQATNDFDPNLLIGEGGFGKSHVTTNVKGSFGYVDPEYFRTKYLTKKSDVYSFGVVLIEVICGKPALDDARPTQQMNLALWALSCHGKGTFYEMMDPYLSGKVNMDSLKKVSELAWKCLEERRVNRPPMGVDSNYLLDASEDASFRLGWKPAIRNDTDLYRKSQSIIYLDLSQNMLEGNIPPNIGNCHKLQYLCLSQNRLKGTIPFEVFSLFSLTNLLDLSQNSLSGSIPKELGMLKNIDELDVSENHLSGDIPRTIGECISLEYLHLQGNSFHGIIPSSLASLKGLQYLDLSRNLLSGPIPDVLQNISTLKHLTVSFNMLDGEVPTKGVFGNASELAVTGNNKLCGDYKGQEFKALVFDYMKNGSLEQWLHPGKVDFEHPRTLDLYQRLNIINDVASALHYLHHECEQPILHCDLKPSNVLLDDDMVAHVSDFGIARLVSTIDGTFHKQTSTIGIKGTVGYTPPEYGAGSEVSAYGDMYSFGILMLEMLTGRRPTDKMFEDDQNLHNFVEISLPDNLLQILDPQLVPRDEEDELEEENNGNFSPNVEKCLVSLFRIGLACSMESPKERMSVADVTRELNLVRKAFLGGVDTREEIKGKSNDMVILETDVYAV 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi370g00030 638 ProSiteProfiles Protein kinase domain profile. 288 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi370g00030 638 Pfam Protein tyrosine and serine/threonine kinase 48 100 IPR001245 GO:0004672|GO:0006468
Sebi370g00030 638 SUPERFAMILY Protein kinase-like (PK-like) 46 155 IPR011009 -
Sebi370g00030 638 Gene3D Transferase(Phosphotransferase) domain 1 24 160 - -
Sebi370g00030 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 436 448 IPR008271 GO:0004672|GO:0006468
Sebi370g00030 638 Gene3D Transferase(Phosphotransferase) domain 1 387 620 - -
Sebi370g00030 638 FunFam Leucine-rich receptor-like protein kinase family protein 183 279 - -
Sebi370g00030 638 FunFam Leucine-rich repeat receptor protein kinase EMS1 280 375 - -
Sebi370g00030 638 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 46 155 - -
Sebi370g00030 638 Pfam Protein kinase domain 378 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi370g00030 638 Pfam Leucine rich repeat 287 346 IPR001611 GO:0005515
Sebi370g00030 638 SUPERFAMILY Protein kinase-like (PK-like) 374 604 IPR011009 -
Sebi370g00030 638 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 387 616 - -
Sebi370g00030 638 ProSiteProfiles Protein kinase domain profile. 1 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi370g00030 638 SMART serkin_6 345 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi370g00030 638 Gene3D Ribonuclease Inhibitor 182 379 IPR032675 -
Sebi370g00030 638 SUPERFAMILY L domain-like 189 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi370g00030 Sebi-Chr370 466231 470080 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi370g00030 373 612 Receptor kinase-like Gene Family AT3G47580 44.856 1.33e-66 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Sebi370g00030 Pkinase 2.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi370g00030 - - qsa:O6P43_020214 403.675