Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi370g00027 ATGAAGTCCTTTTCTGTCATGTTAATGTTACCTGCTGCATTCTGGCCTATATGTCTTCACTTACTATTTGTTTTCAACTCACTGTGGAATTACGCAACTGCCTCTTCTGCTTCTTCTGCTTTCGGAAACGAGACCGATCATTTGGCGTTGTTGAAATTGAAGGAATCAATATCCAATGACCCCTTTGGAATTCTACATTCTTGGAATGCTTCTATCCATTTCTGCGACTGGCATGGAGTCACGTGCAGCCCTCCTCCCATGCACCAAAGAGTAACAGAGTTGAACCTACCAGCATATCGGTTGCATGGATCCTTGTCTCCTCATGTTGGTAATCTCTCTTTTCTGAGATACCTGAATCTCGAAAACAACAGTTTCTATGGAAATATCCCACAAGAATTGGGTCGGTTGTTACAATTGCAGCAACTCTCTCTCACCAATAACTCCTTCACAGGGGAGATTCCTTCAAACTTGACAAGTTGCTCTCATCTCAAAGTCTTATTCTTAGATGGGAATAATCTGATTGGAAAAATACCAATTGGAATCGGCTCTCTTCGGAAGCTTCAACTATTGGCGCTTGCAAAAAACAATTTAACAGGGGGAGTCCCATCATTTATAGGGAATCTTTCATCCCTAATTGGTCTTTCGGTGGCTTATAATAACTTAGAGGGAGATATTCCACAACAAATATGCCGCCTCAAAAATCTGACAATTATACAGGTGTTTATGAATAAATTGTATGGTACATTTCCTTCTTGTCTTTATAATATGTCATCTCTTACTTACATCGCAGCTGCAAGTAATCACTTTTATGGCTCTCTTCCACCCAACATGTTCGACACACTCCCCAATCTCCAATTTTTTGCAATTGGCGGGAATCAATTCTCAGGTCCAATCCCTACTTCCATGGCAAATGTGTCCACCCTTACAAAACTTGATATCAGTCGAAATCATTTTGTGGGACGAGTTCCAAGTCTAGAGAAGCTACAAGATCTTCAGTGGTTAAATTTGGAACTGAATCATTTAGGTGGCAATACAACTAAGGATTTGGAGTTTTTAAAATCATTGACAAACTGCAGTAAGTTACTAATGATCTCTATATCCTATAATAATTTTGAAGGTAGTTTACCGAATTTTGTGGGCAATTTGTCCAACCAAATAAGCCAACTACATCTTGGGGGTAACAAGATATCAGGAAAAATTCCCGTGGAATTGGGAAATCTAATTAGCTTAACTATCTTGACCATGGAAATAAATCATTTTGAGGGGACTATTCCAACTGCTTTTGCCAAGTTTCAAAATATGCAAGTATTAGATTTGAGCCAAAACAAATTTTCAGGACACATACCAGCCTTCATAGGAAATCTCAGTCAATTGTTTTATTTGGATTTATCAAAGAATGTGTTAGAAGGAAATATTCCTCCAAGCATAGGAAACTGCCAAAAGTTACAACACCTAAACCTTTCGCAGAACAACCTTAAAGGAACCATACCCTCTGAGGTTTTTAGCCTTTCCTCATTAAAAAACTTATTGGACTTGTCACAAAACTCTTTGAGTGGCACTCTCCCTTATGAAGTGGGTAGTCTAACAAATATCAATTGGCTGGATCTCTCTGAGAATCAACTGTCTGGTAACCTTCCTGGAACCATTGGAGAATGCATCAGCTTGGAGTACCTTTATTTGCAAGGAAATTCCTTCCATGGAATCATGTCTTCCTCCTTGGCTTCACTCAAAGGACTTCAACGTTTAGACCTATCACGAAACCGCTTGTCTGGATCAATTCCTAAAGGTCTACAGAACATTTCATTCCTAGAATACTTGAATGTTTCTTTTAACATGTTGGATGGTGAAGTACCTACAGAAGGTGTCTTTCGAAATGCAAGTGCCTTAATGGTGATTGGAAACAACAACCTTTGTGGAGGTATTTCAAAGTTGCATTTACCGCCATGCCCTGTCAAAGGTATGAAACCTGCCAAACACCATAATTTCAGGTTGATAGCAGTCATAGTTAGTGTGGTTGCTTTTCTTCTCATATTGTTATGTATTCTAACAATCTACTGGATGAGGAAAAGAAACAAGAAGCCATCTTCTGATTCACCAACAATTGATCAGCTAGCTAAGGTTTCATATCAAAACCTACACAATGGAACTGATGGGTTCTCAGCTAGAAACTTGATAGGATCTGGAAATTTTGGCACTGTCTACAAAGGAACTCTTGAGTCAGAAGATAGAGTTGTTGCCATAAAGGTCCTAAACCTTCAAAAGAAGGGAGCACACAAGAGTTTTATTGCTGAATGTGATGCACTCAAAAATATTAGACACCGAAATCTGGTTAAGATTTTGACATGTTGTTCCAGTACAGATTACAAAGGTCAAGAATTTAAAGCTCTAGTTTTTGAGTACATGAACAATGGAAGCTTAGAAAGTTGGTTGCATCCGACAACAGAAAATACAGATCAACCCAAATCATTGAACCTTGAGCAAAGGTTTAGTATTATTTCCAATGTTGCTTTAGCAGTTCACTATCTTCACTATGAATGTGAGGAGCCTGTCATTCATTGTGATTTAAAGCCTAGCAACGTTCTTCTTGATGAATGCATGGTAGCACATGTGGGTGATTTTGGTTTAGCAAGATTTCTCTCAAGTGTTGGAGTCTCTCTCAAGCAAAGTAGCACAATTGGAATAAAGGGGACTATTGGTTATGCGCCTCCAGAGTATGGAATGGGTTCTGAGGTGTCAACTGAAGGTGACATGTATAGCTTCGGAATTCTGGTTTTAGAGATGTTAACTGGAAAGAGGCCCACAGATGAAATGTTTAAAGATGGTCTCAATCTCCATAATTATGTTAAAAGTTCCATTTCAAATCACATTTTGCAGATTGTGGAACCAACTATTCTCCCCAATGGATTCAGACAAGCCAATGGCATGCATCCTAATGTGGAGAAATGTTTACTTTCACTTTTTAGGATTGCGCTTTCTTGTTCAGTGGAATCACCAAGAGAAAGAATGAGTATGGTTGATGTCACTAGGGAGCTTAATCTTATCAAAAGCTTATTTCCTCATGGGGTTTAA 3069 0.3877 MKSFSVMLMLPAAFWPICLHLLFVFNSLWNYATASSASSAFGNETDHLALLKLKESISNDPFGILHSWNASIHFCDWHGVTCSPPPMHQRVTELNLPAYRLHGSLSPHVGNLSFLRYLNLENNSFYGNIPQELGRLLQLQQLSLTNNSFTGEIPSNLTSCSHLKVLFLDGNNLIGKIPIGIGSLRKLQLLALAKNNLTGGVPSFIGNLSSLIGLSVAYNNLEGDIPQQICRLKNLTIIQVFMNKLYGTFPSCLYNMSSLTYIAAASNHFYGSLPPNMFDTLPNLQFFAIGGNQFSGPIPTSMANVSTLTKLDISRNHFVGRVPSLEKLQDLQWLNLELNHLGGNTTKDLEFLKSLTNCSKLLMISISYNNFEGSLPNFVGNLSNQISQLHLGGNKISGKIPVELGNLISLTILTMEINHFEGTIPTAFAKFQNMQVLDLSQNKFSGHIPAFIGNLSQLFYLDLSKNVLEGNIPPSIGNCQKLQHLNLSQNNLKGTIPSEVFSLSSLKNLLDLSQNSLSGTLPYEVGSLTNINWLDLSENQLSGNLPGTIGECISLEYLYLQGNSFHGIMSSSLASLKGLQRLDLSRNRLSGSIPKGLQNISFLEYLNVSFNMLDGEVPTEGVFRNASALMVIGNNNLCGGISKLHLPPCPVKGMKPAKHHNFRLIAVIVSVVAFLLILLCILTIYWMRKRNKKPSSDSPTIDQLAKVSYQNLHNGTDGFSARNLIGSGNFGTVYKGTLESEDRVVAIKVLNLQKKGAHKSFIAECDALKNIRHRNLVKILTCCSSTDYKGQEFKALVFEYMNNGSLESWLHPTTENTDQPKSLNLEQRFSIISNVALAVHYLHYECEEPVIHCDLKPSNVLLDECMVAHVGDFGLARFLSSVGVSLKQSSTIGIKGTIGYAPPEYGMGSEVSTEGDMYSFGILVLEMLTGKRPTDEMFKDGLNLHNYVKSSISNHILQIVEPTILPNGFRQANGMHPNVEKCLLSLFRIALSCSVESPRERMSMVDVTRELNLIKSLFPHGV 1022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi370g00027 1022 CDD STKc_IRAK 725 1014 - -
Sebi370g00027 1022 Pfam Protein kinase domain 722 1005 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi370g00027 1022 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 801 1020 - -
Sebi370g00027 1022 PANTHER OS04G0122200 PROTEIN 231 1012 - -
Sebi370g00027 1022 SMART LRR_typ_2 480 503 IPR003591 -
Sebi370g00027 1022 SMART LRR_typ_2 528 552 IPR003591 -
Sebi370g00027 1022 SMART LRR_typ_2 112 136 IPR003591 -
Sebi370g00027 1022 SMART LRR_typ_2 455 479 IPR003591 -
Sebi370g00027 1022 SMART LRR_typ_2 576 599 IPR003591 -
Sebi370g00027 1022 SMART LRR_typ_2 600 625 IPR003591 -
Sebi370g00027 1022 SMART LRR_typ_2 208 232 IPR003591 -
Sebi370g00027 1022 Pfam Leucine rich repeat 554 613 IPR001611 GO:0005515
Sebi370g00027 1022 Pfam Leucine rich repeat 409 468 IPR001611 GO:0005515
Sebi370g00027 1022 FunFam LRR receptor-like serine/threonine-protein kinase EFR 690 800 - -
Sebi370g00027 1022 Gene3D Ribonuclease Inhibitor 105 348 IPR032675 -
Sebi370g00027 1022 Gene3D Ribonuclease Inhibitor 349 655 IPR032675 -
Sebi370g00027 1022 Gene3D Ribonuclease Inhibitor 39 104 IPR032675 -
Sebi370g00027 1022 Pfam Leucine rich repeat N-terminal domain 44 83 IPR013210 -
Sebi370g00027 1022 ProSiteProfiles Protein kinase domain profile. 719 1018 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi370g00027 1022 FunFam LRR receptor-like serine/threonine-protein kinase EFR 352 655 - -
Sebi370g00027 1022 SUPERFAMILY Protein kinase-like (PK-like) 692 1012 IPR011009 -
Sebi370g00027 1022 Gene3D Phosphorylase Kinase; domain 1 700 800 - -
Sebi370g00027 1022 SMART serkin_6 719 1018 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi370g00027 1022 ProSitePatterns Serine/Threonine protein kinases active-site signature. 850 862 IPR008271 GO:0004672|GO:0006468
Sebi370g00027 1022 SUPERFAMILY L domain-like 386 639 - -
Sebi370g00027 1022 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 86 351 - -
Sebi370g00027 1022 ProSitePatterns Protein kinases ATP-binding region signature. 725 748 IPR017441 GO:0005524
Sebi370g00027 1022 Gene3D Transferase(Phosphotransferase) domain 1 801 1018 - -
Sebi370g00027 1022 ProSiteProfiles Leucine-rich repeat profile. 481 503 IPR001611 GO:0005515
Sebi370g00027 1022 SUPERFAMILY L domain-like 43 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi370g00027 Sebi-Chr370 413331 416528 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi370g00027 40 1018 Receptor kinase-like Gene Family AT3G47570 46.620 0.0 865
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Sebi370g00027 Pkinase 5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi370g00027 - - gmx:100792724 1412.9