Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi370g00025 ATGAAGCCCATTTCTCTCGTGTTACCTGCATTTAGGTCTATGTACCTTTACCTACTTCTCTTTACTTTGAACTCCCTATGGCTTGACCCAAACATAACCACTGCCTCTGCATCAGGAAATGAGAGTGACCTTTTGGCATTGCTCAAATTCAAGGAATCAATAACCAGTGACCCATATGAAATCCTACGTACTTGGAATGGTTCTACCCACTTCTGCAAGTGGCGTGGAATCACATGCAACCCCATGCATCAAAGGGTTGGCGAGTTGAACCTACAAGGATATCAATTGCAAGGATCCATATCTCCTCATGTGGGTAATCTCTCTCTTTTGAGGAACCTAAACCTCGGAAACAACAGCTTCCATGGTAAAATTCCACAAGAACTAGGAGGAGTCACACCATTCATAGGAAATCTCTCATTCCTAACTGGTCTCTTGGTGGGTTATAATAATTTGGAGGGAAATATTCCACAAGAAATATGCTGCCTCAAAAACTTGACAACAATTTCAGCAAATGTCAACAAATTATCTGGTACATTTCCTTCTTGTCTTTACAATACGTCATCTCTTATTGTAATCTCAACCTCAAACAATGAGTTTAATGGCTCTCTTCCACCTAACATGTTCCATACCCTCCCTAGTCTCCAAGTTTTTGAAGTTGGCAATAATCAAATCTCAGGTCCAATCCCCACCTCCATTTCAAACGCTTCTGCCCTTCAAATACTTGGGATCAGTCTCAACCAATTCGTAGGACAAGTTCCAAGTATGGGGAAGCTAAAAGATCTTTGGTCCCTACATGTAGGTGGGAACAATTTAGGTGGCAATTCAAATAAGGATTTGGAGTTTATAAAACCTTTGACAAACTGTAGCAAGTTGTACATACTTGATATAGACAGCAATAATTTTGGAGGTAGTTTGCCAAATTCCTTGAGCAATTTGTCCACCCATCTCAGCCTTCTATATCTTGGGGCACAAAATATGTTAGAAGGAAATATTCCTCCAAGTATAGGAAACTGCCAAAAGCTACAATACCTAAACCTTTGGCAAAACAACTTGAGAGGAAACATACCTTTAGAGGTTTTCAATATTTCCTCTTTAACAAGCTTACTGAACTTGGCACAAAATAGATTGAGTGGAAATCTACCTAGTGAAGTGGGCCAGTTAAAAAGTAATTTCTTCCATGGAACCATACCACCCTCTTTGGCTTCCCTCAAAGGTCTTCTACGTTTAGACCTATCACGAAATCGCTTGTCTGGATCAATTCCTAAAGATCTGCAAAACATTTCTTTCTTGGAATACTTTAATGTATCTTTTAACATGCTGGGCGGTGAGGTTCCAACTGGAGGTGTCTTTCGAAATGCAAGTGAGTTAGCAGTAACCGGAAACAATAAGCTTTGTGGAGGTATTACAGAGTTGCATCTACCGCCATGCCCTGACAAAGGTATGAAACCTGCCAAACACCATAATTTCAGGTTGATAGCAGTCATAGTTAGTGTGGTTGCTTTTCTTCTCATATTGTTATGTATTCTAACAATCTACTGGATGAGGAAAAAAAACAAGAAGCCATCTTCTGATTCACCAACAATTGATAAACTAGCTAAGGTTTCATATCAAAACCTACACAATGGAACTGATGGGTTCTCAGCTAGAAACTTGATAGGATCTGGAAATTTTGGCACTGTCTACAAAGGAACTCTTGAATCGGAAGATAGAGTTGTTGCCATAAAGGTTCTGACAAGTTGTTCCAGTACAGATTACAAAGGTCAAGAATTTAAAGCTCTAGTTTTTGAGTACATGAACAATGGAAGCTTAGAAAGCTGGTTGCATCCCACAACAGAAAATACAGATCAGTCCAAATCACTGACCCTTGAGCAAAGCAATGTGCTTCTTGATGATTGTATGGTAGCTCACGTGAGTGATTTTGGCTTAGCAAGATTGCTCCCAAGTGTTGGAGTCTCTCTCAAGCAAAGTAGCACAATTGGAATAAAGGGGACTATTGGTTATGCACCTCCAGAGTATGGAATGGGTTCTGAGATGTCAATTGAAGGCGACATGTATAGCTTTGGGATTCTAGCTTTAGAAATGCTAACTGGAAGGAGACCCACAGATGAAATGTTTGGAGATGGTCATAATCTTCATAATTATGTTAAACTTTCAATTTCAAATAACATTTTGCAGATTGTGGACCCAGCTATTCTCCACCATGGATTAGATGTGGCTTCTGAAAGTGAGGACCTCAGCATTATGCATCCTAAGATAGAGAAATGTTTACTTTCACTTTTTAGTATTGCACTTGCCTGTTCCGTGGTATCACCGAAAGAAAGAATGAGTATGGTTGATGTCACAAGGGAGCTTAATAAAATCAAAACTTTCTTTCTTACTGGGGTTTAA 2388 0.3953 MKPISLVLPAFRSMYLYLLLFTLNSLWLDPNITTASASGNESDLLALLKFKESITSDPYEILRTWNGSTHFCKWRGITCNPMHQRVGELNLQGYQLQGSISPHVGNLSLLRNLNLGNNSFHGKIPQELGGVTPFIGNLSFLTGLLVGYNNLEGNIPQEICCLKNLTTISANVNKLSGTFPSCLYNTSSLIVISTSNNEFNGSLPPNMFHTLPSLQVFEVGNNQISGPIPTSISNASALQILGISLNQFVGQVPSMGKLKDLWSLHVGGNNLGGNSNKDLEFIKPLTNCSKLYILDIDSNNFGGSLPNSLSNLSTHLSLLYLGAQNMLEGNIPPSIGNCQKLQYLNLWQNNLRGNIPLEVFNISSLTSLLNLAQNRLSGNLPSEVGQLKSNFFHGTIPPSLASLKGLLRLDLSRNRLSGSIPKDLQNISFLEYFNVSFNMLGGEVPTGGVFRNASELAVTGNNKLCGGITELHLPPCPDKGMKPAKHHNFRLIAVIVSVVAFLLILLCILTIYWMRKKNKKPSSDSPTIDKLAKVSYQNLHNGTDGFSARNLIGSGNFGTVYKGTLESEDRVVAIKVLTSCSSTDYKGQEFKALVFEYMNNGSLESWLHPTTENTDQSKSLTLEQSNVLLDDCMVAHVSDFGLARLLPSVGVSLKQSSTIGIKGTIGYAPPEYGMGSEMSIEGDMYSFGILALEMLTGRRPTDEMFGDGHNLHNYVKLSISNNILQIVDPAILHHGLDVASESEDLSIMHPKIEKCLLSLFSIALACSVVSPKERMSMVDVTRELNKIKTFFLTGV 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi370g00025 795 PANTHER OS04G0122200 PROTEIN 317 792 - -
Sebi370g00025 795 Gene3D Ribonuclease Inhibitor 206 279 IPR032675 -
Sebi370g00025 795 Gene3D Ribonuclease Inhibitor 40 205 IPR032675 -
Sebi370g00025 795 FunFam Nuclear pore complex protein NUP107 40 205 - -
Sebi370g00025 795 Gene3D Ribonuclease Inhibitor 280 482 IPR032675 -
Sebi370g00025 795 Pfam Leucine rich repeat N-terminal domain 41 80 IPR013210 -
Sebi370g00025 795 Gene3D Phosphorylase Kinase; domain 1 509 598 - -
Sebi370g00025 795 Pfam Protein kinase domain 624 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi370g00025 795 SUPERFAMILY L domain-like 369 469 - -
Sebi370g00025 795 ProSitePatterns Protein kinases ATP-binding region signature. 552 575 IPR017441 GO:0005524
Sebi370g00025 795 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 283 479 - -
Sebi370g00025 795 Gene3D Transferase(Phosphotransferase) domain 1 599 791 - -
Sebi370g00025 795 ProSiteProfiles Protein kinase domain profile. 435 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi370g00025 795 SUPERFAMILY Protein kinase-like (PK-like) 530 782 IPR011009 -
Sebi370g00025 795 SUPERFAMILY L domain-like 66 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi370g00025 Sebi-Chr370 390591 393819 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi370g00025 88 792 Receptor kinase-like Gene Family AT3G47570 36.173 2.89e-138 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Sebi370g00025 Pkinase 3.2e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi370g00025 - - ccaj:109792361 738.413