Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi370g00022 ATGCTGAATGTCTCTGAGAATCATCTGTCTGGCGATATTCCTGAAACCATTGGAGAATGCACAAGCTTGGAATACCTTTATTTGCAAGGGAATTCCTTCAATGGAAACATACCATCTTCTCTGGCTTCACTCAAAGGTCTGCGATATTTAGACGTATCACGAAATCGCTTGTCTGGATCAATTCCTAATGATCTGCAGAATATTTCTTTCCTAGAATACTTCAATGTATCTTTTAACATGTTGGAAGGAGATGTGCCAACTGAAGGTGTCTTTCAAAATGCAAGTGGGTTTGGGGTAACTGGAAACAATAACCTTTGTGGAGGTATTTCAAAGTTGCATCTACCGCTATGCCCTGTCAAAGGTATGAAACCTGCCAAACACCATAATTTCAGGTTGATAGCAGTGATAGTTAGTGTAGTTGCTTTTCTTCTCATACTACTATTGATTCTAACTATCTATTGGATAAGGAAAAGAAACAAGAAACCATCTTCTGATTCACAAACAATTGATCTGTTGGCTAAGGTTTCATACCAAAACATACACAATGGAACCAATGGGTTCTCAGCAAGAAACTTAATTGGATCTGGAAATTTTGGCTCTGTCTACAAAGGAACGCTTCAATTAGAAGATACATTTATTGTTGCCATAAAAGTCCTAAACCTTCAAAAGAAGGGAGCTCACAAGAGTTTCATTGCTGAATATTACAAAGGTCAAGAATTTAAAGCTCTAGTATTTGAGTACATGAACAATGGAAGCTTAGAAAGTTGGTTGCATCCAACAACAGAAATTGAAGGTCCACAAAAATCATTGAACCTTGAGCAAAGGTTAAACATTATTGCCGATGTTGCTTCAGCATTTCATTATCTTCATTATGAATGTGAGCAACCTATCATTCATTGTGATTTAAAGCCTAGCAATGTTCTTCTTGATGATTGTATGGTAGCTCACGTGAGTGATTTTGGCATAGCAAAATTGCTCCCAAGTATTGGAGTCTCCTTGATGCAAAGTAGCACAGTTGGAATAAAGGGGACGATTGGTTATGCTCCTCCAGAGTATGGAATGGGTTCTGAGGTGTCCATTGAAGGTGACATGTATAGCTTTGGGATTTTAGTTTTAGAAATGTTAACTGGAAGGAGACCCACAGATGAAATGTTTGAAGATGGTCATAATCTTCATAATTATGTTAAAATTTCAATTTCAGATGACATTTTGAAGATAGTGGACCCAACTATTCTCCTCAATGGATTAGAATGGGATTCTGACAATGGGGACCTTGGCATTATGCATCCTAATGTAGAGAATTGTTTGCTTTCACTTTTTAGTATTGCACTTGCCTGTTCGGTGGAATCACCGAAAGAAAGAATGAGTATGGTTGATGTCATAAGGGAGCTTAATATAATCAAAAGTCTTTCCTACTGGGGTTTGATGGAAGCTAGCTGCTGA 1443 0.377 MLNVSENHLSGDIPETIGECTSLEYLYLQGNSFNGNIPSSLASLKGLRYLDVSRNRLSGSIPNDLQNISFLEYFNVSFNMLEGDVPTEGVFQNASGFGVTGNNNLCGGISKLHLPLCPVKGMKPAKHHNFRLIAVIVSVVAFLLILLLILTIYWIRKRNKKPSSDSQTIDLLAKVSYQNIHNGTNGFSARNLIGSGNFGSVYKGTLQLEDTFIVAIKVLNLQKKGAHKSFIAEYYKGQEFKALVFEYMNNGSLESWLHPTTEIEGPQKSLNLEQRLNIIADVASAFHYLHYECEQPIIHCDLKPSNVLLDDCMVAHVSDFGIAKLLPSIGVSLMQSSTVGIKGTIGYAPPEYGMGSEVSIEGDMYSFGILVLEMLTGRRPTDEMFEDGHNLHNYVKISISDDILKIVDPTILLNGLEWDSDNGDLGIMHPNVENCLLSLFSIALACSVESPKERMSMVDVIRELNIIKSLSYWGLMEASC 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi370g00022 480 SUPERFAMILY L domain-like 2 106 - -
Sebi370g00022 480 ProSitePatterns Serine/Threonine protein kinases active-site signature. 297 309 IPR008271 GO:0004672|GO:0006468
Sebi370g00022 480 Gene3D Phosphorylase Kinase; domain 1 151 243 - -
Sebi370g00022 480 PANTHER OS04G0122200 PROTEIN 2 466 - -
Sebi370g00022 480 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 1 114 - -
Sebi370g00022 480 SMART serkin_6 187 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi370g00022 480 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 248 473 - -
Sebi370g00022 480 Pfam Leucine Rich Repeat 47 67 IPR001611 GO:0005515
Sebi370g00022 480 Pfam Protein kinase domain 233 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi370g00022 480 ProSitePatterns Protein kinases ATP-binding region signature. 193 217 IPR017441 GO:0005524
Sebi370g00022 480 SUPERFAMILY Protein kinase-like (PK-like) 160 465 IPR011009 -
Sebi370g00022 480 ProSiteProfiles Protein kinase domain profile. 187 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi370g00022 480 Gene3D Transferase(Phosphotransferase) domain 1 248 472 - -
Sebi370g00022 480 Gene3D Ribonuclease Inhibitor 1 123 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi370g00022 Sebi-Chr370 373316 374969 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi370g00022 2 93 Receptor kinase-like Gene Family AT3G47570 31.624 1.83e-07 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Sebi370g00022 Pkinase 2.4e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi370g00022 - - gmx:100792724 699.893