Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi370g00001 ATGCCACAAAACTGCATAGCACCAAAACCAGAATACTGTAGTAGTCACTCTGTGGAAGTACCACCAGAGATGACTGAACCCCATAACTCAACTGTCCTTGCCTACCCCTCCATACGAACCAATGAACAATCTTTACCAAAACTCATTATGTACCCCATAGTTTTGAAGTTTGAGGAACTGGTGTACAAAGTTAAACTAGAGCAAAAAGGATCATGTTGGGGCAGTACATGGAGTTGCAAAGAGAAGACCATACTGAATGGGATCACAGGTGTGGTATGTCCAGGAGAAATACTGGCTATGCTGGGCCCATCAGGTAGTGGAAAAACCACACTTCTTACAGCTCTTGGGGGCCGTCTCAGTGGTAAACTATCTGGAAAGATCACATACAATGGTCAGCCTTTCTCAGGTGCCATAAAAAGAAGAACAGGTTTTGTGGCTCAAGATGATGTGCTATACCCTCATCTCACTGTCAGTGAAACTCTAATGTTCACTGCACTTCTGAGGCTACCAAACAGTTTGACCAGAGAAGAAAAAGTTGAGCATGTAGAGAGAGTAATCACTGAGTTAGGACTAACTCGTTGCAGGAACAGCATGATAGGAGGCCCACTTTTGAGAGGAATATCAGGTGGAGAGAAAAGGAGGGTGAGCATAGGCCAAGAGATGCTCATCAATCCTAGCCTATTGTTGCTAGATGAGCCCACTTCAGGTTTGGATTCCACCACAGCATTAAGGATCCTAAACACCATCAAACGCCTTGCAAGTGGGGGAAGAACTGTTATCACCACCATTCATCAACCTTCTAGTCGCCTCTACTATATGTTTGACAAGGTGGTCTTGCTCTCTGAAGGCTGTCCTATCTATTATGGTCCTGCTTCAACTGCTCTTGAGTACTTTTCATCTGTTGGTTTTTCCACATGTGTGACTGTCAATCCAGCAGATCTCTTGCTTGATCTTGCCAACGGGATTGGCCCGGACTCCAAGCATGTAACTGAACAAAGTGAGGGTCTGGAACAGGAGAGGAAGATGGTGAGAGAATCTCTCATCTCTGCTTATGAGAAGAACATAGCTACAAGGCTGAAAGCTGAGGTTTGCAGCCTGGAGGTGAACAACTACAACATCACAAAAGATGCTTGCACAAGAAGTCCCATAAAACCAGAGCAATGGAGCACAAGCTGGTGGCATCAGTTCAAAGTATTATTACAGAGGGGAGTTAGGGAGCGAAGGTATGAAGCCTTCAACAGGCTGAGAATCTTCCAAGTCATAAGTGTAGCTTTCCTTGGTGGACTCTTGTGGTGGCATACACCAGAGTCACACATTCAAGACCGGGTTGCCTTGCTTTTTTTCTTCTCTGTCTTCTGGGGATTCTACCCTCTCTATAATGCAGTTTTCACATTTCCTCAAGAGAGGAGAATGCTAATCAAGGAAAGGTCATCAGGAATGTACCGCCTTTCTTCCTACTTTCTAGCAAGAACAATAGGAGACTTGCCACTGGAGCTTGCACTTCCAACAGCATTTGTCTTCATAATCTATTGGATGGGAGGGCTTAAACCTGATCCTGTGACTTTTATCCTTTCTCTTCTTGTGGTTCTTTACAGTGTTGTTGTCTCTCAAAGTCTTGGCCTAGCATTTGGTGCTATTTTGATGGAGATTAAACAGGCCACTACTCTAGCTTCTGTGACAACCCTTGTATTTCTCATTGCTGGAGGGTACTATGTACAGCAGATTCCTCCCTTCATAGTGTGGCTCAAGTACTTGAGCTATAGCTACTACTGTTACAAGCTTCTTCTGGGTGTCCAATACAATGAAGATGATTATTATGAGTGCTCACAGGGGCAGTTGTGCAAGGTTACAGATTTTCCTCCTATCAAGTCAATGGGTTTGAATCATCTGTGGATTGATGTGTCCATCATGGCCTTGATGTTGGTGGGTTATCGACTACTTGCATATTTAGCACTGCGTAGAGTTAGGTAG 1971 0.4439 MPQNCIAPKPEYCSSHSVEVPPEMTEPHNSTVLAYPSIRTNEQSLPKLIMYPIVLKFEELVYKVKLEQKGSCWGSTWSCKEKTILNGITGVVCPGEILAMLGPSGSGKTTLLTALGGRLSGKLSGKITYNGQPFSGAIKRRTGFVAQDDVLYPHLTVSETLMFTALLRLPNSLTREEKVEHVERVITELGLTRCRNSMIGGPLLRGISGGEKRRVSIGQEMLINPSLLLLDEPTSGLDSTTALRILNTIKRLASGGRTVITTIHQPSSRLYYMFDKVVLLSEGCPIYYGPASTALEYFSSVGFSTCVTVNPADLLLDLANGIGPDSKHVTEQSEGLEQERKMVRESLISAYEKNIATRLKAEVCSLEVNNYNITKDACTRSPIKPEQWSTSWWHQFKVLLQRGVRERRYEAFNRLRIFQVISVAFLGGLLWWHTPESHIQDRVALLFFFSVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFLARTIGDLPLELALPTAFVFIIYWMGGLKPDPVTFILSLLVVLYSVVVSQSLGLAFGAILMEIKQATTLASVTTLVFLIAGGYYVQQIPPFIVWLKYLSYSYYCYKLLLGVQYNEDDYYECSQGQLCKVTDFPPIKSMGLNHLWIDVSIMALMLVGYRLLAYLALRRVR 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi370g00001 656 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 55 307 IPR003439 GO:0005524
Sebi370g00001 656 CDD ABCG_EPDR 52 289 - -
Sebi370g00001 656 FunFam ABC transporter G family member 22 72 301 - -
Sebi370g00001 656 Pfam ABC-2 type transporter 395 600 IPR013525 GO:0016020|GO:0140359
Sebi370g00001 656 Pfam ABC transporter 86 235 IPR003439 GO:0005524
Sebi370g00001 656 Gene3D - 74 301 IPR027417 -
Sebi370g00001 656 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 36 649 - -
Sebi370g00001 656 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 77 299 IPR027417 -
Sebi370g00001 656 Pfam ABC-2 type transporter 264 345 IPR043926 GO:0140359
Sebi370g00001 656 SMART AAA_5 94 284 IPR003593 GO:0016887
Sebi370g00001 656 ProSitePatterns ABC transporters family signature. 207 221 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi370g00001 Sebi-Chr370 6795 9740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi370g00001 84 283 Calmodulin-binding Proteins AT2G36910 30.288 3.38e-14 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi370g00001 K05681 - gmx:100794774 1176.39