Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi36g00094 ATGGACTTTTGGGCAGAATTTGTTGCAAGCAGTGCTGGTAGAGAGTTTGTAGCTGGAGGCTTTGGAGGCACAGCTGGTATCATCTCCAGTTATCCATTGGACACCCTCCGCATCATACAACAGCAATCCAACAAAACCTCTGCTGTCACCATCCTTAAAAATGTGTTGTCCAGGGAAGGACCAGCAGCTCTGTACCGTGGGATGGGTGTGCCATTGGCCTCTGTTACTTTTCAGAATGCTATGGTTTTTCAGAGTTATGCAATTTTCACAAGGGCATTTAGCCCGTCCATTTCTCCTAATGGCCCTCCTTCCCTCAAGTATGTTGGTTTAGGAGGACTAGGTGCCGGTGCTCTCCAAAGCCTATTGGTCTCCCCTGTTGAGTTGGTTAAGATTCGTCGTCAATTACAGAACAGTTCAAACCAATTGACAGAAACCAAAAAGGGTCCTCTCGAGATTGCTCACAACATTTGGAAAAGGGAAGGCATTCGTGGCCTTTATCGAGGACTTGGCATCACTATGCTCAGAGATGCACCTGCCCATGGCTTCTATTTCTGGACATATGAGTACACAAGGGAAAAGCTTCACCCTGGTTGCAGAGAAAATTGTCAAGAAAGCATGAATACTATGTTTATAGCAGGAGGATTAGCCGGGATAGCGAGTTGGATTTTCAATTATCCTACAGATGTTATAAAGACAAGATTGCAGGCTCAGACACCTTCTTCAATGAAATACAAAGGTATTTTGGATTGTGTCCTTAAGATTATTAAAGAAGAAGGATCCATTGTGCTATGGCGGGGTTTTGGAGCTACCCTTGTTAGAGCATTTGTCATAAACAGTGCTATATTTCCTGCTTATGAGATCTCTTTAAGGTGTTTATTTAATAATTGA 888 0.4347 MDFWAEFVASSAGREFVAGGFGGTAGIISSYPLDTLRIIQQQSNKTSAVTILKNVLSREGPAALYRGMGVPLASVTFQNAMVFQSYAIFTRAFSPSISPNGPPSLKYVGLGGLGAGALQSLLVSPVELVKIRRQLQNSSNQLTETKKGPLEIAHNIWKREGIRGLYRGLGITMLRDAPAHGFYFWTYEYTREKLHPGCRENCQESMNTMFIAGGLAGIASWIFNYPTDVIKTRLQAQTPSSMKYKGILDCVLKIIKEEGSIVLWRGFGATLVRAFVINSAIFPAYEISLRCLFNN 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi36g00094 295 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 92 IPR018108 -
Sebi36g00094 295 Gene3D Mitochondrial carrier domain 8 294 IPR023395 -
Sebi36g00094 295 Pfam Mitochondrial carrier protein 11 93 IPR018108 -
Sebi36g00094 295 Pfam Mitochondrial carrier protein 110 194 IPR018108 -
Sebi36g00094 295 Pfam Mitochondrial carrier protein 208 294 IPR018108 -
Sebi36g00094 295 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 10 292 - -
Sebi36g00094 295 PRINTS Mitochondrial carrier protein signature 213 235 IPR002067 GO:0055085
Sebi36g00094 295 PRINTS Mitochondrial carrier protein signature 28 42 IPR002067 GO:0055085
Sebi36g00094 295 PRINTS Mitochondrial carrier protein signature 166 184 IPR002067 GO:0055085
Sebi36g00094 295 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085
Sebi36g00094 295 ProSiteProfiles Solute carrier (Solcar) repeat profile. 204 291 IPR018108 -
Sebi36g00094 295 ProSiteProfiles Solute carrier (Solcar) repeat profile. 103 193 IPR018108 -
Sebi36g00094 295 SUPERFAMILY Mitochondrial carrier 14 286 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi36g00094 Sebi-Chr36 2126640 2128361 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi36g00094 1 295 Antiporters AT1G79900 63.176 1.92e-125 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi36g00094 K15109 - gmx:100812034 436.802