Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi36g00085 ATGTTTAGTGTTTCAATACATTGCAATGGGGATAGGGCTGCATTGATTGATGTAGTTGAGAAGGTTACTAGATTCTATACATTGGAGGAAATTCATTGGGTTCTATTTACTTACAAAGGGGATAGACAATTTGAAATAAGGTTAGTGAATGGGAGAAATGTGGAAGTTGGGTATCCCAAAATTGTAAGTGAGTCTTATGTGGTTAATTGGAAGGTTGAGTCGTATGAGGAAGACCCTTATGAACCTGAATTTTTGTGGGATGTGACTCTGACCAAGGCAGCTGCTTCTGGTGATAATCCTATGATTATTCCTGTTAGGTTTGTGAGAGATGTTCTGAACAAAAAACAAGAAGATGTGATTGTCATAGATGAGAATGGCGATCAGATTTCTTACAAATTGCTGAAGCCTAAAAGGAGGCCAACTGAGCGGTACCTTTCTGGTAGATGGTACGACTTTATTAGGGGAAAGAAGTTGAAGGCTGGAGATAAGCTTAGGTTTTACTCATGTGATAATGTGGAATCTGTCTCTATTTGTATTGATCGCAATTGA 549 0.3843 MFSVSIHCNGDRAALIDVVEKVTRFYTLEEIHWVLFTYKGDRQFEIRLVNGRNVEVGYPKIVSESYVVNWKVESYEEDPYEPEFLWDVTLTKAAASGDNPMIIPVRFVRDVLNKKQEDVIVIDENGDQISYKLLKPKRRPTERYLSGRWYDFIRGKKLKAGDKLRFYSCDNVESVSICIDRN 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi36g00085 182 ProSiteProfiles B3 DNA-binding domain profile. 86 182 IPR003340 GO:0003677
Sebi36g00085 182 Gene3D - 70 181 IPR015300 -
Sebi36g00085 182 SUPERFAMILY DNA-binding pseudobarrel domain 84 172 IPR015300 -
Sebi36g00085 182 CDD B3_DNA 89 167 IPR003340 GO:0003677
Sebi36g00085 182 SMART B3_2 87 181 IPR003340 GO:0003677
Sebi36g00085 182 Pfam B3 DNA binding domain 89 173 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi36g00085 Sebi-Chr36 2002127 2002771 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Sebi36g00085 B3 2e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi36g00085 - - aprc:113861038 88.5817