Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi36g00074 ATGGATGGCATATTGGACTGGATGAATGGAAAAGACATACCAATGATGGATAGGGACACGTCATTTTGGCAGGAGGGTTCAGATGAGCAATCGTTCATTTATGCTAGTCCTTCCTTGGTTGATCAAGATGGTATTGATGGTTTCTTAGTGGGTGAAGGAGACAGTTGTGTGGTATTAGTTGATGCTGATTGGGATGACAACCAAAATGAAGGGGATAAGGATACTGGATATGAGGAAGATCACCAGAATGAAGGGAATGGTAACACCGAACACGGGGAAGAAAATCGAAATGAAGGACATGAATATACTGAACATGAAGAAGAAGCCCAACATAAAGGAGATCAAGATACTGAACATGAGGAAGAAAACCAGAATGAAGGAGATGAAAATAATGAACATGAGGAAGTTGTTATAAGTAGGATTGATAGTTTCGAGGACATAAAGAAAATTGACCTCGTAAGATTCAGCCCACACGAGATCTCTCATTATGACTTTGCTAGTTTGGATGTAGCATACTTGTTCTATTCTTGGTATGGCAGAATGAACGGATTTGCAACTAAAAAAGGGAAAGTTATCTCTAGTAGGAAAATTGGGAGGGTTTTGCAACAAAATTTTTTTTGCAACAAAGAAGGAGGTTATGAAAAAATTGGTTTCCGGAAGAAAGATATCTACAATCAAATTATCAAACAACGACGGTTGCAAAATTCGGATGCAGAATCATCTGTAAAGTACTTGCATAACTTGGGAGTCAATGACCCTTTGATGTTTACTCACCACACAATTGACCCAGATAACAGGCTTGAGCACTTGTTCTGGTGTGAAGGACAACATCAAGGTGTGAAGATTTCTTACATCACTATATTTGATGTGTTGAGCATATGCGGTTCAGAAAAATGGAAGATGACTTTTCCTCCATACATGGTGAACCAGTATTGCAAACCAATCTTCAAGGTCTTGAAAGTGCTTCAAAAGGCAACTAGTATGAATGTGGTAGCATGTAGAGACTTTTACTCATACTCCTTATACACGGTGTACAAGCGTGGTAGGGGAGCCAAGGCATGGAATGTGTCATATAATCCATCCAGTAATGAATTTAAGTGCCCATGCATGTGGTTAGAGTCACGTGGGTTACCATGTGTACACACAATTGCTGTGTTGGACCATCTAAACATCAATGAGCTCCCAAAAGGTTTGGTCCTAAAAAGATGGACTAAAGGAGCAAAGGACAATATTACTAGTTACAACAATGGCAGTGGTACTTGGGACTCACAAAGGATTTTTAAACGTGATGCTCTAAATGATGTATACAGAAAGTTGTCTGTTGTGAATTCTGTAACTATTGAGGAATATAATGATGCGATGGAAAGGTCTTTAAAAGAACTTGCAGAAAAAGAGGCAAAGAGGGCATGTGATATGGTTGGTGGGAGTGAACCGACGTTAAGTGATCATAAAAGATTGAGGAACCCTCTACCTGCAAGGCACAAAGGAAACGTGAGAGCAAGCACTTCCATTGGAGGATTGAGGATTAGGCGCACAACCAAGTGCTCCATTTGCCACGTGGCTGGCCATAATAAGGCCACATGCCCACAACGAGCACAGGATGGACATACTGCATAA 1617 0.4045 MDGILDWMNGKDIPMMDRDTSFWQEGSDEQSFIYASPSLVDQDGIDGFLVGEGDSCVVLVDADWDDNQNEGDKDTGYEEDHQNEGNGNTEHGEENRNEGHEYTEHEEEAQHKGDQDTEHEEENQNEGDENNEHEEVVISRIDSFEDIKKIDLVRFSPHEISHYDFASLDVAYLFYSWYGRMNGFATKKGKVISSRKIGRVLQQNFFCNKEGGYEKIGFRKKDIYNQIIKQRRLQNSDAESSVKYLHNLGVNDPLMFTHHTIDPDNRLEHLFWCEGQHQGVKISYITIFDVLSICGSEKWKMTFPPYMVNQYCKPIFKVLKVLQKATSMNVVACRDFYSYSLYTVYKRGRGAKAWNVSYNPSSNEFKCPCMWLESRGLPCVHTIAVLDHLNINELPKGLVLKRWTKGAKDNITSYNNGSGTWDSQRIFKRDALNDVYRKLSVVNSVTIEEYNDAMERSLKELAEKEAKRACDMVGGSEPTLSDHKRLRNPLPARHKGNVRASTSIGGLRIRRTTKCSICHVAGHNKATCPQRAQDGHTA 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi36g00074 538 Coils Coil 447 467 - -
Sebi36g00074 538 ProSiteProfiles Zinc finger SWIM-type profile. 354 390 IPR007527 GO:0008270
Sebi36g00074 538 MobiDBLite consensus disorder prediction 63 135 - -
Sebi36g00074 538 PANTHER OS01G0519700 PROTEIN 340 467 - -
Sebi36g00074 538 MobiDBLite consensus disorder prediction 69 119 - -
Sebi36g00074 538 MobiDBLite consensus disorder prediction 472 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi36g00074 Sebi-Chr36 1824078 1826615 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi36g00074 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi36g00074 - - ccaj:109791041 144.436