Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi36g00070 ATGAGCGTGGTCGGTTTTGATTTTGGTAATGAGAGCTGCATTGTTGCTGTTGCAAGGCAGAGGGGGATTGATGTTGTGCTCAACGATGAGTCCAAACGTGAAACTCCTGCAATTGTATGCTTTGGTGAGAAACAAAGGTTTCTAGGAACTGCTGGGGCTGCATCTACTATGATGAACCCAAAGAATTCGATCTCACAGATAAAGCGGTTAATTGGTAGACAATTTGCTGATCCTGAATTGCAGCAGGATCTGAAGTCATTGCCTTTTGTTGTCACTGAAGGACCTGATGGATCTCCATTAATTCATGCACGGTACTTGGGTGAAGTTAAAACATTTACACCTACCCAAGTCTTTGGAATGATGTTATCCAATCTTAAAGAAATAGCCCAGAAAAATCTGAATGCAGCCGTTGTTGATTGCTGCATTGGAATTCCTGTTTATTTTACTGATCTTCAGAGGAGAGCAGTCTTGGATGCAGCCACCATCGCAGGTTTGCACCCACTTCGCCTGATTCATGAAACGACAGCAACTGCCTTGGCTTATGGAATTTATAAGACCGATCTTCCTGAAAATGATCAGCTCAACGTTGCTTTTGTTGATGTTGGACATGCTAGCATGCAAGTGTGCATTGCTGGATTTAAAAAGGGGCAGCTGAAAGTGTTGTCCCATGCATATGATAGGTCTTTGGGTGGTAGGGATTTTGATGAGGTCTTGTTCCATCATTTTGCTGCAAAATTTAAGGAGGAGTACAAAATTGATGTTTACCAGAATGCTAGGGCTTGTCTAAGGCTGAGGGCTGCTTGTGAGAAGTTGAAGAAGGTGCTTAGTGCAAATCCAGAGGCACCTCTGAACATTGAGTGCTTAATGGAAGAGAAGGACGTGAGGAGCTTTATTAAGCGTGAGGAGTTTGAGCAACTAAGTCTTCCAATTTTGGAACGTGTGAAGGGACCTTTGGAGAAGGCACTTGCTGAAGCAGGTCTTACAGTTGAGAATGTCCACATGGTTGAGGTGGTTGGTTCTGGTTCTCGTGTACCAGCTATAAACAAAATATTGACGGAATTTTTTAAAAAGGAGCCTAGGCGGACAATGAATGCTAGTGAGTGTGTTGCCAGGGGTTGTGCTTTGCAATGTGCAATTCTCAGTCCAACCTTTAAAGTACGGGAGTTTCAGGTCAACGAAAGCTTTCCTTTCTCAATTTCTCTTTCGTGGAAAGGTTCTGGTCCAGATGCACAGGATGGTGGATCAGATAACAAGCAGAGTACCCTTGTTTTCCCCAAGGGAAATCCCATACCAAGTATCAAGGCACTGACATTTTACAGGACAGGAACCTTTTCAATTGATGTACAATATGATGATGTGAATGGTTTGCAAACACCTGCAAAGATCAGCACATATACTATTGGTCCTTTTCAATCTACAAAAGGTGAAAAGGCAAAGGTTAAAGTGAAAGCTCGTTTGAATCTGCATGGAATTGTATCTGTTGAGTCAGCAACTCTCATGGAAGAGGAAGAAATTGAGGTTCCTGTTGCCAAAGAATCAGCAGGTGAAAATACCAAGATGGAAACTGATGAAGCTCCTGCTGATGCTGCCGCACCTCCTAGCTCCAATGACAATGACGTTAATATGCAGGATGCCAAGGCTACTGCTGATACCCCTGGGGCTGAAAATGGCGTTCCTGAGACAGGAGATAAGCCCGTGCAAATGGAAACTGATACCAAGGTTGAGGTTCCAAAGAAAAAAGTGAAGAAAACAAACATTCCTGTGGCAGAGGTAGTTTATGGAGCATTGGCACCTGTGGATGTCCAGAAAGCTGTAGAGAAGGAGTTTGAAATGGCTTTACAAGATCGAGTGATGGAGGAAACAAAAGACAAGAAAAATGCAGTTGAGGCTTATGTTTATGACATGAGAAACAAGCTTAATGACAAATACCAAGAGTTTGTCACTGCTTCAGACAGGGAAGATTTTACTGCTAAACTTCAGGAGGTGGAAGACTGGTTATATGAGGAAGGTGAAGATGAAACCAAAGGTGTATACATTGCCAAGCTAGAAGAGCTCAAAAAGCAAGGTGATCCAATTGAAGAGCGTTACAAAGAATACATGGATAGAGGCACAGTAATTGATCAACTCATCTATTGTGTAAATAGTTACAGAGAAGCTGCAATGTCAAATGATCCCAAATTTGATCACATTGACATCAATGAGAAACAGAAGGTCTTAAATGAATGTGTGGAAGCTGAGAACTGGCTTAGGGAGAAGAAGCAGCAACAGGACTCTCTCCCCAAATATGCCACCCCTGTACTCTTGTCAGCTGACATAAGGAAGAAAGCTGAGGCAGTTGATAGGTTCTGCAAGCCAATTATGATGAAACCAAGGCCGGCCAAGCCAGCTACCCCTGAAGCACCAGCAACCCCGCCTCCTCAGGCTGGTGAGCAGCAACAAGCACCACATCAGGAGGATGCTAATGCCAGCACTAATGAGACTGCAGGGGATAGTGGTAATCAGGTCCCACCAGCCTCTACTGAACCGATGGAAACTGACAAATCAGAGAACACAGGCTCTGCCTAA 2565 0.4374 MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAIVCFGEKQRFLGTAGAASTMMNPKNSISQIKRLIGRQFADPELQQDLKSLPFVVTEGPDGSPLIHARYLGEVKTFTPTQVFGMMLSNLKEIAQKNLNAAVVDCCIGIPVYFTDLQRRAVLDAATIAGLHPLRLIHETTATALAYGIYKTDLPENDQLNVAFVDVGHASMQVCIAGFKKGQLKVLSHAYDRSLGGRDFDEVLFHHFAAKFKEEYKIDVYQNARACLRLRAACEKLKKVLSANPEAPLNIECLMEEKDVRSFIKREEFEQLSLPILERVKGPLEKALAEAGLTVENVHMVEVVGSGSRVPAINKILTEFFKKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSGPDAQDGGSDNKQSTLVFPKGNPIPSIKALTFYRTGTFSIDVQYDDVNGLQTPAKISTYTIGPFQSTKGEKAKVKVKARLNLHGIVSVESATLMEEEEIEVPVAKESAGENTKMETDEAPADAAAPPSSNDNDVNMQDAKATADTPGAENGVPETGDKPVQMETDTKVEVPKKKVKKTNIPVAEVVYGALAPVDVQKAVEKEFEMALQDRVMEETKDKKNAVEAYVYDMRNKLNDKYQEFVTASDREDFTAKLQEVEDWLYEEGEDETKGVYIAKLEELKKQGDPIEERYKEYMDRGTVIDQLIYCVNSYREAAMSNDPKFDHIDINEKQKVLNECVEAENWLREKKQQQDSLPKYATPVLLSADIRKKAEAVDRFCKPIMMKPRPAKPATPEAPATPPPQAGEQQQAPHQEDANASTNETAGDSGNQVPPASTEPMETDKSENTGSA 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi36g00070 854 FunFam Heat shock 70 kDa protein 4 1 87 - -
Sebi36g00070 854 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 596 696 IPR029048 -
Sebi36g00070 854 FunFam Heat shock 70 kDa protein 4 230 313 - -
Sebi36g00070 854 Gene3D Actin; Chain A, domain 4 230 313 - -
Sebi36g00070 854 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 629 IPR029047 -
Sebi36g00070 854 MobiDBLite consensus disorder prediction 507 565 - -
Sebi36g00070 854 Gene3D - 598 705 IPR029048 -
Sebi36g00070 854 MobiDBLite consensus disorder prediction 791 805 - -
Sebi36g00070 854 PRINTS 70kDa heat shock protein signature 2 15 - -
Sebi36g00070 854 PRINTS 70kDa heat shock protein signature 363 383 - -
Sebi36g00070 854 PRINTS 70kDa heat shock protein signature 30 42 - -
Sebi36g00070 854 PRINTS 70kDa heat shock protein signature 140 160 - -
Sebi36g00070 854 PRINTS 70kDa heat shock protein signature 332 348 - -
Sebi36g00070 854 CDD HSPA4_like_NDB 2 381 - -
Sebi36g00070 854 FunFam Heat shock 70 kDa protein 4 38 113 - -
Sebi36g00070 854 PANTHER HSC70CB, ISOFORM G-RELATED 1 846 - -
Sebi36g00070 854 Gene3D - 38 113 - -
Sebi36g00070 854 Gene3D - 5 374 - -
Sebi36g00070 854 FunFam Heat shock 70 kDa protein 4 110 205 - -
Sebi36g00070 854 MobiDBLite consensus disorder prediction 806 854 - -
Sebi36g00070 854 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Sebi36g00070 854 Pfam Hsp70 protein 3 697 IPR013126 GO:0005524|GO:0140662
Sebi36g00070 854 FunFam Heat shock 70 kDa protein 14 387 594 - -
Sebi36g00070 854 MobiDBLite consensus disorder prediction 507 523 - -
Sebi36g00070 854 MobiDBLite consensus disorder prediction 788 854 - -
Sebi36g00070 854 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 594 IPR029047 -
Sebi36g00070 854 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Sebi36g00070 854 Gene3D - 186 360 - -
Sebi36g00070 854 FunFam Heat shock 70 kDa protein 4 596 706 - -
Sebi36g00070 854 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 711 794 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi36g00070 Sebi-Chr36 1763845 1767853 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi36g00070 4 438 Calmodulin-binding Proteins AT1G16030 35.160 1.70e-86 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi36g00070 K09489 - gmx:100778196 1451.03