Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi36g00058 ATGGGTGTGAACTCCAATAGAGTGGAGCATTTTGATAGCCATGAAAACCCCATGAAATTCCAAACCGAGATACCAATGCCACCATTAGAAATTCACCAAGTTCGCTTACCACCACACCGAACCACTCTCCGCAAACTCACACAAAGGCTCTCTGAAATCTTCTTCCCTGATGATCCACTCTCCCGTTTCAAGAACCAACCTCCCTTCACCAAGTTCCTTCTAGGACTTCAATACTTTTTCCCCATTTTCCAGTGGGGTCCTCACTATAACCTCTCCCTTCTCCGTTCTGATTTCATCTCTGGCCTCACCATTGCTAGCCTCGCCATTCCTCAGGGAATTAGTTATGCCAAGCTTGCAAACTTGCCACCTATTATTGGATTGTATTCAAGTTTTGTGCCCCCATTGATATACTCCTTGCTTGGGAGTTCTAGACATCTTGGTGTTGGACCTGTTTCAATTGCGTCTTTGGTTATGGGATCAATGTTAAGTGAGACTGTTTCTTACACTCAAGACCCAATTCTCTATCTGCAATTGGCTTTCACTGCCACTTTTGTTGCTGGTTTGTTCCAAGCATCTCTGGGTATATTAAGGTTAGGCTTTGTAATTGATTTCCTGTCGAAGGCAACTTTGGTGGGTTTCATGGCGGGTGCTGCGATTATTGTGTCACTGCAGCAGCTGAAAGGGTTACTTGGGATAGTGCACTTTACTAACAAGATGCAAATAATTCCTGTACTGGACTCTGTTTACAAGCAAAGACACGAGGGATCTGACAGTTCTGAAAATTTGCAACAGAGCTTGAAGAAACCAAAACTTTTCTGGGTTTCAGCAGCTGCCCCTTTGACATCAGTTATTCTGTCAACCCTTTTAGTCTTTCTTCTCAAAAATAAGGCTCATAACATTGCAATTATTGGGTACTTACCAAAGGGCCTTAATCCACCATCATTAAACATGTTATACTTCAGTGGTTCTTACTTGGCTCTTGCTATCAAAACTGGCATTGTCACAGGGATCTTATCTCTCACTGAAGGAATTGCAGTAGGTAGAACATTTGCAGCACTTAAGAATTACCAGGTGGATGGAAACAAGGAAATGATGGCAATTGGTCTTATGAACATAGCTGGCTCTTGTTCTTCATGCTATGTCACAACAGGAACACAAATATTCCACAACATAAACCAATACAAAGAAGCTTCAAGAGTTCCTTCATTTCTCATTTTGGCTGTTGAGTCTCCAATCTATTTTGCTAATTCAACTTACCTTCAAGAAAGGATATTGAGATGGGTTCGAGAAGAGGAAGAGTGTACAAAAGGAAATAATGGAAGTTTATTGAAGTGTGTAATTTTAGACATGACAGCTGTGACAGCCATAGACACAAGTGGACTTGAAACTTTAGGTGAACTTAGAAAATGCTGGAGAATAGATCACTTCAGATACGTCAAAAATTTTGGATTCCTTGGATCAAAAGGAGTGTATCTCACAGTGGGAGAAGCTGTGGCTGACATTTCATCATCCGAGAAAGTTCAACCTTGA 1530 0.4144 MGVNSNRVEHFDSHENPMKFQTEIPMPPLEIHQVRLPPHRTTLRKLTQRLSEIFFPDDPLSRFKNQPPFTKFLLGLQYFFPIFQWGPHYNLSLLRSDFISGLTIASLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSLLGSSRHLGVGPVSIASLVMGSMLSETVSYTQDPILYLQLAFTATFVAGLFQASLGILRLGFVIDFLSKATLVGFMAGAAIIVSLQQLKGLLGIVHFTNKMQIIPVLDSVYKQRHEGSDSSENLQQSLKKPKLFWVSAAAPLTSVILSTLLVFLLKNKAHNIAIIGYLPKGLNPPSLNMLYFSGSYLALAIKTGIVTGILSLTEGIAVGRTFAALKNYQVDGNKEMMAIGLMNIAGSCSSCYVTTGTQIFHNINQYKEASRVPSFLILAVESPIYFANSTYLQERILRWVREEEECTKGNNGSLLKCVILDMTAVTAIDTSGLETLGELRKCWRIDHFRYVKNFGFLGSKGVYLTVGEAVADISSSEKVQP 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi36g00058 509 ProSitePatterns SLC26A transporters signature. 123 144 IPR018045 GO:0008271|GO:0008272
Sebi36g00058 509 Gene3D STAS domain 388 506 IPR036513 -
Sebi36g00058 509 PANTHER SULFATE TRANSPORTER 385 471 IPR001902 GO:0016020|GO:0055085
Sebi36g00058 509 SUPERFAMILY SpoIIaa-like 398 499 IPR036513 -
Sebi36g00058 509 CDD STAS_SulP_like_sulfate_transporter 394 469 - -
Sebi36g00058 509 Pfam Sulfate permease family 94 385 IPR011547 GO:0016020
Sebi36g00058 509 ProSiteProfiles STAS domain profile. 393 469 IPR002645 -
Sebi36g00058 509 Pfam STAS domain 394 469 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi36g00058 Sebi-Chr36 1523076 1527448 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi36g00058 384 509 Inorganic Solute Cotransporters AT3G15990 57.343 5.23e-42 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi36g00058 K17471 - qsa:O6P43_027800 634.409