Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi36g00050 ATGTCACGTATTAGCAAGGTCATAGTAGGCCTCATGCCTGCGATTTTAATGGTGTTGGTTCAAGTTGCTTATACTGTGTCTATGATATTGTACAAGTTGGTTGAAAATGATGGAATGAGCTTGAAAGTCCTTATCGCCTATCGCTTCCTCTTTGCATCAGTTTTCTTGGTTCCTCTTGCTTACTTCATGGAAAGGAAGAGCAAGCCGGAGATTACAGCGGAAGTACTTTTCCAAGCATTTCTTTGTGGATTATTTGGGGCATCCTTACAACAAAATTTGTTCATGGAAGCAATGGTTTTGGCAGGTGCAACATATGCTACGGCCATGTACAATCTCATTCCTGGTTTTACCTTTATCTTAGCCGTATGTTTTAGATTGGAAAGGTTGAAAATTGGAACATTAGTAGGGAAGGCCAAAGTACTTGGCACTTTGATGGGAATTGGTGGATCCATGATGCTTACCTTCTATAAGAGCACCGAGATTCACATCTGGTCAACACATATAAATCTAGTGAAACATCTTCATACAAAAAATGTGCCTACCACTTATGCTTGGGGATCCTTTCTTGCTTTTGGCACTTGTGTATCATTTTCCGTATGGTTGATTATTCAGGCTAGGATGAGTGAGAAGTTTCCTTGGCATTATACAAGTGCAGCTTTGATGTCAGTGATGGCTTCCATTCAATCAATTATATTTGCTCTATGCATGGAAAGAGATCATTGGAATCAATGGAAGCTTGGTTGGAACATTAGGCTTCTCACTGCAGTTTACACGGGTGTTCTGTCCTCTGGAGTAGTTTGGGTTCTTATTTCATGGTGCATACGCATAAAAGGCCCACTTTATGTTTCAATTTTCAACCCCCTCTTCCTTGTTCTAGTGGCCATTGCAGGGTCTCTACTATTAGATGAAAGGCTTTATGTGGGAAGTGTAATAGGATTACTTTTTATTGTGTTCGGGCTATACATTGTCTTGTGGGGTAAAGGTAAAAAATTAAAGAGAACTCCAGAGCAAGAGCAAAAGCTAACAAAAGGCTCACTGGAAGTTGAACCATTGGAGATAATTGTCACAAAGGAGACAGATGGTAAAAGTGTTGATGATAATAATGACATAAAGTCTGGCATTACTATTCCGTCTAGCTTGTCGATGGAAAATGATCATTTGTAA 1164 0.3969 MSRISKVIVGLMPAILMVLVQVAYTVSMILYKLVENDGMSLKVLIAYRFLFASVFLVPLAYFMERKSKPEITAEVLFQAFLCGLFGASLQQNLFMEAMVLAGATYATAMYNLIPGFTFILAVCFRLERLKIGTLVGKAKVLGTLMGIGGSMMLTFYKSTEIHIWSTHINLVKHLHTKNVPTTYAWGSFLAFGTCVSFSVWLIIQARMSEKFPWHYTSAALMSVMASIQSIIFALCMERDHWNQWKLGWNIRLLTAVYTGVLSSGVVWVLISWCIRIKGPLYVSIFNPLFLVLVAIAGSLLLDERLYVGSVIGLLFIVFGLYIVLWGKGKKLKRTPEQEQKLTKGSLEVEPLEIIVTKETDGKSVDDNNDIKSGITIPSSLSMENDHL 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi36g00050 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 223 329 - -
Sebi36g00050 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 154 - -
Sebi36g00050 387 PANTHER WAT1-RELATED PROTEIN 12 331 IPR030184 GO:0016020|GO:0022857
Sebi36g00050 387 Pfam EamA-like transporter family 185 324 IPR000620 GO:0016020
Sebi36g00050 387 Pfam EamA-like transporter family 12 137 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi36g00050 Sebi-Chr36 1302382 1312764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi36g00050 15 349 Nodulin-like Gene Family AT1G25270 40.588 2.73e-90 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi36g00050 - - aprc:113856022 545.814