Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi369g00040 ATGAGGGTTATTAAAGATGTGGCTTCTGCGGTCTTATACTTGCATGAAGGGTGGGAAGCTAAAGTAGTGCATAGGGACATTAAGGCTAGCAATGTGTTGTTGGATAAGGATATGAATGGAAGGCTTGGAGATTTTGGGTTAGCCAAAATGCACAGCCATGGTCAAATTTCTAGCACCTCAAAATTGGTTGGAACAGTTGGGTACATGGCTCCTGAAGGGAAAATAGTGGTCACTCCACTTGTCCTTGCTAGAGGCTGCCTCTGGAAGTTTAAATGTGTGTTGGGAGACCAAACTTGCTTCACTGCTGTTAGGTGGCTACCGCAGCCTCCATATACCATAATGCCTTGTCAAGTACAGAACCATGCTTGGCAGTTTGGGGAAGAAGCATGGGAGGCTACTGAGCACGTCTTTGCAACTGCAGGACATGCTGTTAACACTGCTTGGAATGTCTCTAAGATACGGAAGGCCATCAATCCAGTCTCTTCAGCAGCCACTGCAGGAGTACTGAGAAATTCTGCAAATTAA 525 0.459 MRVIKDVASAVLYLHEGWEAKVVHRDIKASNVLLDKDMNGRLGDFGLAKMHSHGQISSTSKLVGTVGYMAPEGKIVVTPLVLARGCLWKFKCVLGDQTCFTAVRWLPQPPYTIMPCQVQNHAWQFGEEAWEATEHVFATAGHAVNTAWNVSKIRKAINPVSSAATAGVLRNSAN 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi369g00040 174 Gene3D Transferase(Phosphotransferase) domain 1 1 97 - -
Sebi369g00040 174 Pfam Protein kinase domain 3 72 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi369g00040 174 ProSitePatterns Serine/Threonine protein kinases active-site signature. 22 34 IPR008271 GO:0004672|GO:0006468
Sebi369g00040 174 ProSiteProfiles Protein kinase domain profile. 1 174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi369g00040 174 PANTHER - 2 72 - -
Sebi369g00040 174 Pfam Senescence domain 124 157 IPR009686 -
Sebi369g00040 174 SUPERFAMILY Protein kinase-like (PK-like) 2 72 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi369g00040 Sebi-Chr369 954143 955179 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi369g00040 2 87 Receptor kinase-like Gene Family AT3G55550 56.667 1.35e-29 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Sebi369g00040 Pkinase 1.9e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi369g00040 - - gsj:114386544 137.887