Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi369g00039 ATGTTGTCAATAAAATTACTTTTGTGGTCTCTGTTTTTGGCAGGGTGCCACTTCGCCATCTCATGCAACGCCAACCAGCAGGCTGAATACCTCTACAACTTTATTCAATCACGGAGGTCTCACAAGCCCTCACATGGAGAAGAACCTTCAATTGTTGATAAAGATGGTACTGTGGATGCAAATTATTTTTCGCACAAGGGATATGTTGTTGAGCAACAATCATCACCAGGATCGATGGAAGCTGACAAAGTGAAGGCTTTGCCAGGACAACCCCAAGGGGTTGATTTTGATCAATACGCTGGCTATGTAACTGTGGATGCCAAGGCAGGGAGAACACTTTTCTACTACTTTGTGGAATCACCTCACAATTCTTCCACCAAACCCCTTGTTCTATGGCTAAATGGAGGGCCCGGGTGCTCTTCCCTGGGGTATGGGGCCATGCAAGAACTGGGACCTTTCAGAGTCAACAGTGATGGAAGAACACTTTACAGAAATGAATACGCATGGAACAACGTGGCAAATGTTATTTTCCTAGAGTCTCCAGCAGGAGTAGGCTTTTCATATTCAAACACTCCTTCAGATTACTCTAAAACTGGTGACAATAGCACAGCCATGGATTCTTACACTTTCCTTCTAAACTGGCTCCAAAGATTTCCTCACTATAAAACTCGAGACTTTTTCATAACTGGAGAAAGTTATGCTGGCCATTATGTCCCTCAGTTAGCTGACATTATTCTCTCAAACAATAAGCTAAGAAAAAACCACACAGTGATCAATTTGAAAGGGATTGCGATTGGGAATGGGTGGATAGATGATGTTATGTGTACAAAGGGAATGTATGACTATTTCTGGACACATGCTCTGAACTCTGATGAAACCCATGAAGGAATTGAAAAACATTGTGACTTTGAAAACGGTAACTTTACAAGTGAATGCTACAAATATCAAAGTATAGCAGATGATGAAGTTGGAAGTCTTGACATATATAATGTATATGCTCCACCTTGCGATTCAGCTGCAATAAAAACTGGTGCCACTCCCTCCACTTACTCTGGCACCAATTTCGACCCCTGTGCTGACGATTATACCAAGTCCTACTTAAATCTTGCTCAAGTTCAAGAGGCTCTCCATGCTAAAGCCTCAAAATGGTTTCCTTGCAGTGGAGTGGGATGGACTGATAGCCCAGCAACTATTCTACCCGCTATAAATCGGTTAATATCAAGTGGTATAAGCACCTGGATATACAGTGGCGATACAGATGGGCGTGTTCCTATAACCTCAACAAGGTATTCAATAAATACCTTAAAACTTCCCGTGGATACAACATGGCGTCCATGGTACTCTGGCAATGAGGTTGGAGGATATGTAGTTGGGTACAAAGGGCTCACATTCGTTACTGTAAGAGGAGCTGGCCACATGGTTCCAAGCTACCAACCACAGAGAGCATTAACAATGATCTCATTTTTCCTTCGTGGAGAACTTCCACCTGAAACATCCTCTTAA 1503 0.4271 MLSIKLLLWSLFLAGCHFAISCNANQQAEYLYNFIQSRRSHKPSHGEEPSIVDKDGTVDANYFSHKGYVVEQQSSPGSMEADKVKALPGQPQGVDFDQYAGYVTVDAKAGRTLFYYFVESPHNSSTKPLVLWLNGGPGCSSLGYGAMQELGPFRVNSDGRTLYRNEYAWNNVANVIFLESPAGVGFSYSNTPSDYSKTGDNSTAMDSYTFLLNWLQRFPHYKTRDFFITGESYAGHYVPQLADIILSNNKLRKNHTVINLKGIAIGNGWIDDVMCTKGMYDYFWTHALNSDETHEGIEKHCDFENGNFTSECYKYQSIADDEVGSLDIYNVYAPPCDSAAIKTGATPSTYSGTNFDPCADDYTKSYLNLAQVQEALHAKASKWFPCSGVGWTDSPATILPAINRLISSGISTWIYSGDTDGRVPITSTRYSINTLKLPVDTTWRPWYSGNEVGGYVVGYKGLTFVTVRGAGHMVPSYQPQRALTMISFFLRGELPPETSS 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi369g00039 500 Gene3D - 398 492 - -
Sebi369g00039 500 ProSitePatterns Serine carboxypeptidases, histidine active site. 462 479 IPR033124 GO:0004185
Sebi369g00039 500 PRINTS Carboxypeptidase C serine protease (S10) family signature 214 239 IPR001563 GO:0004185|GO:0006508
Sebi369g00039 500 PRINTS Carboxypeptidase C serine protease (S10) family signature 462 475 IPR001563 GO:0004185|GO:0006508
Sebi369g00039 500 PRINTS Carboxypeptidase C serine protease (S10) family signature 178 188 IPR001563 GO:0004185|GO:0006508
Sebi369g00039 500 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 177 IPR001563 GO:0004185|GO:0006508
Sebi369g00039 500 FunFam Carboxypeptidase 78 338 - -
Sebi369g00039 500 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Sebi369g00039 500 Gene3D - 358 389 - -
Sebi369g00039 500 Gene3D alpha/beta hydrolase 78 338 IPR029058 -
Sebi369g00039 500 ProSitePatterns Serine carboxypeptidases, serine active site. 228 235 IPR018202 GO:0004185
Sebi369g00039 500 SUPERFAMILY alpha/beta-Hydrolases 84 493 IPR029058 -
Sebi369g00039 500 Pfam Serine carboxypeptidase 88 491 IPR001563 GO:0004185|GO:0006508
Sebi369g00039 500 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 82 479 IPR001563 GO:0004185|GO:0006508
Sebi369g00039 500 FunFam Carboxypeptidase 398 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi369g00039 Sebi-Chr369 929086 933961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi369g00039 363 493 Calmodulin-binding Proteins AT2G22960 30.882 4.17e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi369g00039 K16297 - gmx:100820473 833.943