Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi369g00014 ATGTTGCAGCTTTCTATTCAACGAGGCAAGTTAAAGAAGTTGAACTTTCTGAGGCCTCAGATCTCTGCTTTGGGAAGTTACCATTTTTCAACCGCTGCCGAGCCATCTTCCAGTAAGCGTAATCCCCCGAGGGTTCCAAATCTTATTGGGGGCAAGTTTCTTGACTCAAAATCATCTACCTTCATCGATGTTATAAATCCAGCAACCCAAGAAGTTGTTTCACAAGTTCCTTTGACTACAGATGAAGAGTTTAAGGCTGCTGTGTCTGCAGCAAAGAAGGCCTTTCCATCATGGCGTAACACTCCAATTACGACACGCCAACGTGTTATGTTGAAGCTCCAGGAGCTTATACGCAGAGATATGGATAAACTTGCTCTCAATGTGACTACTGAACAAGGAAAGACATTAAAGGATGCACAAGGAGATGTATTTCGTGGATTAGAGGTGGTGGAACATGCTTGTGGGATGGCAACTCTACAAATGGGGGAGTATGTTTCCAATGTCTCACATGGAATTGATACTTACAGCATTAGAGAACCACTTGGTGTTTGTGCTGGTATTTGTCCTTTCAACTTTCCTGCAATGATTCCCTTGTGGATGTTCCCTATGGCTGTTACCTGTGGCAATACCTTTGTTCTAAAACCATCAGAGAAAGACCCAGGTGCTTCTGTAATGCTTGCTGAATTGGCATTGGAGGCTGGTTTGCCTAAGGGTGTCTTAAATATAGTTCATGGAACCCATGATGTTGTGAATGCTATTTGCGATGATGATGATATCAAAGCCATATCTTTTGTTGGTTCAAATGTTGCTGGAATGCACATATATTCAAGAGCAGCAGCTAAAGGGAAACGTGTTCAGTCTAATATGGGGGCCAAAAATCATGCAATTGTCATGCCAGATGCAAATGTTGATGCTACTCTAAATGCTTTAGTTGCTGCTGGTTTTGGTGCTGCTGGACAAAGGTGCATGGCTCTCAGCACAGTTGTTTTTGTTGGAGGCTCAAAATCATGGGAAGCTAAACTTATAGAGCGTGCGAAAGATCTTAAAGTAAATGCTGGAACTGAACCTGATACAGACCTTGGTCCTGTCATCAGCAAACAGGCAAAGGAGAGGATACACAAATTAGTTCAATCTGGGGTTGAGAGTGGTGCCAAACTACTGCTTGACGGAAGAAATATAGTGGTCCCGGGATATGAATCTGGCAATTTTATTGGCCCAACCATCTTATCAGATGTGACTCCTAACATGGAGTGCTACAAGGAGGAAATTTTTGGCCCAGTTCTTCTTTCAATGGAGGCTGATAGCTTGGAAGAGGCCATAAACATTATCAACCAAAACAAGTATGGAAATGGTGCATCTATTTTTACTACATCTGGTGTCGCTGCAAGGAAATTTCAGACAGAAATTGAGGCTGGACAGGTTGGCATCAATGTTCCCATTCCAGTTCCTTTGCCCTTTTTCTCTTTTACTGGCAACAAGGCATCATTTGCCGGGGATCTCAATTTCTATGGCAAGGCTGGGGTTAACTTCTATACACAGATCAAAACAATAACCCAGCAATGGAAAGATTCAGCTGGTGGTAGCAAGATTAACATGGCAATGCCAACCTCTCAAAAATCTTGA 1623 0.4276 MLQLSIQRGKLKKLNFLRPQISALGSYHFSTAAEPSSSKRNPPRVPNLIGGKFLDSKSSTFIDVINPATQEVVSQVPLTTDEEFKAAVSAAKKAFPSWRNTPITTRQRVMLKLQELIRRDMDKLALNVTTEQGKTLKDAQGDVFRGLEVVEHACGMATLQMGEYVSNVSHGIDTYSIREPLGVCAGICPFNFPAMIPLWMFPMAVTCGNTFVLKPSEKDPGASVMLAELALEAGLPKGVLNIVHGTHDVVNAICDDDDIKAISFVGSNVAGMHIYSRAAAKGKRVQSNMGAKNHAIVMPDANVDATLNALVAAGFGAAGQRCMALSTVVFVGGSKSWEAKLIERAKDLKVNAGTEPDTDLGPVISKQAKERIHKLVQSGVESGAKLLLDGRNIVVPGYESGNFIGPTILSDVTPNMECYKEEIFGPVLLSMEADSLEEAINIINQNKYGNGASIFTTSGVAARKFQTEIEAGQVGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVNFYTQIKTITQQWKDSAGGSKINMAMPTSQKS 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi369g00014 540 Pfam Aldehyde dehydrogenase family 54 517 IPR015590 GO:0016491
Sebi369g00014 540 SUPERFAMILY ALDH-like 42 522 IPR016161 GO:0016491
Sebi369g00014 540 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 64 498 IPR016162 GO:0016491
Sebi369g00014 540 FunFam Methylmalonate-semialdehyde dehydrogenase (Acylating) 290 490 - -
Sebi369g00014 540 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 290 490 IPR016163 GO:0016620
Sebi369g00014 540 FunFam Methylmalonate-semialdehyde dehydrogenase [acylating] 49 296 - -
Sebi369g00014 540 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 11 537 IPR010061 GO:0004491
Sebi369g00014 540 NCBIfam CoA-acylating methylmalonate-semialdehyde dehydrogenase 47 521 IPR010061 GO:0004491
Sebi369g00014 540 CDD ALDH_F6_MMSDH 45 521 IPR010061 GO:0004491
Sebi369g00014 540 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 315 326 IPR016160 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi369g00014 Sebi-Chr369 231927 245917 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi369g00014 14 505 Aldehyde Dehydrogenase Gene Family AT2G14170 82.317 0.0 841
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi369g00014 K00140 - gmx:100791508 992.645