Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi369g00002 ATGGATAATCTGTATGAAGTTCCAATATATAATTTGGATGATGACAAAGATATGGGCAACGGTGTTGGTTCTAATGATAGTGTTAGCGGAGATTGTACTAATAATGATGAAGCAAATGATAGTGGTAATAGAGAAACTAATAATAATGGAGATACCTATAATAATGATGAAAGAAATGAGCCACCAATGGTTGATGTTGGAGGTGATGTGTGTAAAAGGATAACAGAATTGACTGTTGATGATATACTAGGATTAGAGTTTGGATCTCAAAAGGAAGCATATGAATTTTACAATCAATATGCTAAAGCTCACGGATTAATGAAAAGGAAAGATGAGATAAAAAGGGATGTTAGGGGTAACATTGTAATGCGGCAGTTTGTATGCAACAGAGAAGGATTGAGGAACAAAAGGCCTTTGATGAGGTTAGATCGAAAAAGGGATCATAGAGCAATCACTCGCACTAATTGTGAAGCTAAATTACGAATACGCTTCAATTGA 498 0.3494 MDNLYEVPIYNLDDDKDMGNGVGSNDSVSGDCTNNDEANDSGNRETNNNGDTYNNDERNEPPMVDVGGDVCKRITELTVDDILGLEFGSQKEAYEFYNQYAKAHGLMKRKDEIKRDVRGNIVMRQFVCNREGLRNKRPLMRLDRKRDHRAITRTNCEAKLRIRFN 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi369g00002 165 MobiDBLite consensus disorder prediction 11 63 - -
Sebi369g00002 165 Pfam FAR1 DNA-binding domain 95 163 IPR004330 -
Sebi369g00002 165 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 24 163 - -
Sebi369g00002 165 MobiDBLite consensus disorder prediction 22 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi369g00002 Sebi-Chr369 20811 21308 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi369g00002 FAR1 1.5e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi369g00002 - - ccaj:109792835 148.288