Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi367g00022 ATGGAGGAAAGGAAGGAGAAGTGTTGGAGAATGGAAGTGGAGGAGAACCTGAGAAGGCTTCACTCTCTCTTGTTCGGTGCCGAGCGTGCCCTCCAAAACAACGACTTCTCCTCCGCCTACGTTCTCGCCCTTCGCCTCCTCGGATTCCTCGACTCACGCTCTCACTCAGACGTCGATGAAGCCTTCATTCAACCTATTCGCCGCGAAGCCCTCGCTCACCTCCACTCCGCTCGACGATCTCTCACTCCTTTAACCGATCGCAAAGAGGTCCCAGGATGTATTTTTGGCACATCAGGAGATATTGACATTGGGAAGATTCAGAATTCGAAGTATTTTCAAGCTCTTCTCCAGCAATCTAATGAAAAGGATTTGCATCAATTGGTTGATCAACTGGGGAAGCAAGACAAAGCAGGCATCACAGCATCAAAGGAAATGGTGCAAGCAAAGTTAACATCCATGTGTGGAAAAAACAGCTTGAGGACTAGTAGTAATGGTTCCAAGAGTTTATTCAACTTGAAAAACAACAGCTCTGAGGACTGCATGATTGTTGAAAGGCCTCAATCATATGCCAACCATACAAAGGGTCCTGGTGTCTCTTCATTCTTGGAAATTGAAGGAGAAGAAAGAGCTTCTGGAAACATTTTTTTGGCAAAACGTGTACACATGGAAAATAATAGCCCCAGAGTTGGTTATGTGAAGTCACCTTCAAGCAAGGAGGAAGTTAATTCCGATGTTTGTGGCAATGGGTTTGTTACTGCAAGAGCAAAATTGGAAATGGAAGTGAAGCAAAGGCGAGGAGCAGTTGGTTCACCTAGTGCATCTGTCTCACCACAGTGTGATAACAATCCTTCCAATAGGTTATATGGTGGGAGATCATATGGCGTTTCACGACGTGGCTTCCGTGGTAATTTTGTTCCCCCTATTAAATCCAATGGGAACAATAATGGAAATTCGAGTTCACGAATTGCTGGAAAGTGTGATGATTCTTTAGATGACTCTACAAAGAGATGTTTGGAAATGTTGTGTGGTCCTGATGGTGAGCTTCCTGAGAAATTGAGAAATTTGGAACCTCGCCTCATTGAACACGTTAGTAACGAGATTATGGATAAAGATCCCAATGTTCGGTGGGATGATATTGCTGGATTGGAGCATGCCAAGAAATGTGTTACTGAGATGGTCATATGGCCTCTGCTACGTCCTGACATATTTAAAGGCTGCCATTCTCCTGGGCGAGGTCTGCTTCTGTTTGGTCCACCAGGAACTGGTAAAACAATGATAGGAAAAGCCATAGCAGGGGAGGCAAAGGCAACCTCTTTTACATATCTGCAACGTAAGTCAGATGGTGAGCATGAATCAAGTAGACGGCTAAAGACACAGTTCTCATTGAAATGGAAGGCTTTGACAGTGGTAGCGAGCAAATTCTATTATAGGGGCAACAAATCGTCCCAAGAGCTTGATGAAGCAGCACGAAGGAGACTTACTAAAAGACTCTATATTCCCCTACCATCCTCAGAGGCAAGAGCTTGGATTATACGTAACCTTTTGGAGAAGGATGGATTATTCAAGCTGTCAAATGAGGAAATGGATACCATATGCAACTTAACGGAAGGTTATTCAGGATCAGACATGAAAAACTTAGTGAAAGATGCTTCTATGGGTCCCCTAAGAGAGGCCTTAAGACAAGGCATAGAAATTACAAAGTTGAAAAAGGAGGACATGCGACCAGTAACTCTTCAGGACTTCGAGAATGCCCTGCAAGAAGTTAGGCCTTCTGTTTCCCCAAATGAACTTGGCACTTATGATCAATGGAACAAGCAGTTTGGAAGCCTGTCACTGTAG 1839 0.4426 MEERKEKCWRMEVEENLRRLHSLLFGAERALQNNDFSSAYVLALRLLGFLDSRSHSDVDEAFIQPIRREALAHLHSARRSLTPLTDRKEVPGCIFGTSGDIDIGKIQNSKYFQALLQQSNEKDLHQLVDQLGKQDKAGITASKEMVQAKLTSMCGKNSLRTSSNGSKSLFNLKNNSSEDCMIVERPQSYANHTKGPGVSSFLEIEGEERASGNIFLAKRVHMENNSPRVGYVKSPSSKEEVNSDVCGNGFVTARAKLEMEVKQRRGAVGSPSASVSPQCDNNPSNRLYGGRSYGVSRRGFRGNFVPPIKSNGNNNGNSSSRIAGKCDDSLDDSTKRCLEMLCGPDGELPEKLRNLEPRLIEHVSNEIMDKDPNVRWDDIAGLEHAKKCVTEMVIWPLLRPDIFKGCHSPGRGLLLFGPPGTGKTMIGKAIAGEAKATSFTYLQRKSDGEHESSRRLKTQFSLKWKALTVVASKFYYRGNKSSQELDEAARRRLTKRLYIPLPSSEARAWIIRNLLEKDGLFKLSNEEMDTICNLTEGYSGSDMKNLVKDASMGPLREALRQGIEITKLKKEDMRPVTLQDFENALQEVRPSVSPNELGTYDQWNKQFGSLSL 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi367g00022 612 MobiDBLite consensus disorder prediction 265 288 - -
Sebi367g00022 612 Pfam Vps4 C terminal oligomerisation domain 574 608 IPR015415 -
Sebi367g00022 612 Gene3D - 448 604 IPR027417 -
Sebi367g00022 612 MobiDBLite consensus disorder prediction 307 323 - -
Sebi367g00022 612 MobiDBLite consensus disorder prediction 304 323 - -
Sebi367g00022 612 MobiDBLite consensus disorder prediction 269 288 - -
Sebi367g00022 612 Pfam ATPase family associated with various cellular activities (AAA) 413 439 IPR003959 GO:0005524|GO:0016887
Sebi367g00022 612 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 372 607 IPR027417 -
Sebi367g00022 612 PANTHER AAA DOMAIN-CONTAINING 443 609 - -
Sebi367g00022 612 Gene3D - 348 441 IPR027417 -
Sebi367g00022 612 Gene3D - 502 588 - -
Sebi367g00022 612 FunFam Fidgetin like 1 502 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi367g00022 Sebi-Chr367 270320 275761 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi367g00022 328 610 Calmodulin-binding Proteins AT3G56690 22.222 1.00e-14 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi367g00022 K22766 - gmx:100776024 935.25