Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi366g00021 ATGGATAAGCAAGTGATATCCTACCTCTCCTCATGTTCCTCTTCACCAATTTCATATCTTATGCTTCATCTTCCTCATGTCCCATGGATCTCAGCTATGTTGAGACTTTTCCTTGGGACACATCAACCTGCAGAGGTCCAATTGATACACAGCACTGTTGCCAAGCCCTTCTTAGCCTCTTGGTATAGGCTTGCTCAACACCTCAAAGAAACTTTTCAGTTTCAACTTTCTGATGAAAACACTTCCACCACTTGTTTATCTGATTTCAAAATCAAGCTTGCAGCTTTATCAATAGACCCATCTTTGGTCCCTTCTTGCTTCCAAAACTCTACCCAATTTGTCACTAACCCTTCCAATTGTGCAGGTATTAATAACACACAAGATTGGAAGCAAAAGGTTGGCATGATGAGTCCTTTAGACACATCTTGCCAAGGGGACATGAGTTCTCAAACTCGTTGCAGTATTTGCACTGATGCTGGCCTTAAAGTGACTTCACAGCTGAATAGTATTGACCCAAATGCCACAAAGTGTTTTTATTTCTCAATCTTGTATGCTGCAGCTGTTGTTAATCAGTTTGGTCCAACAGATGTAGGCACTGCTGGTTGCATATTAGGCATGCCACTGGCTTCAAAAGGGTCATCAAACAGAGCACAAGTGTTGAAAATTGTTTTTGGGTTATTGGGTGCTCTTATTGGTGTTCTACTTGCTTTTGCATTGATAATCATGTACAGGAAGTGGGATAAGAAAAGGAAGGAAGATCTTTATCACAGAAATGTTGAAAACAGTGTCAGGGAAAGTGTTTTGCCTAATGCTGGTGCAAAATGGTTTCATATATCAGAGCTTGAAAAGGCAACAAATAAATTTGCACAGAAGAATGTGATTGGTCAAGGTGGTGATGGGATTGTGTACAAAGGGACCCTTTCAGATGGAACTGTGGTAGCGGTAGCAGTTAAGGAAATGCTTGATTTGGAAACTAAAGGGGATGAAGAGTTCTGCTATGAGGTGGAGATTATAAGCAAAATAAAGCACAGGAATCTTGTTGCTCTTAGGGGTTGTTGTGTTTCAAGTGATAATTTGAAAGGTAAGAGGAGGTTTTTAGTTTATGATTTTATGCCTAATGGTAGCCTTAGTTACCAATTGTCTCTTACTGGGGCTAATAGGCTAACTTGGCCACAGAGAAAGAACATAATCCTTGATGTGGCTAAGGGGCTTGCTTATTTGCATTATGAAATCAAACCCCCAATTTATCACCGTGACATAAAGGCTACTAACATACTTTTGGATTCCAAAATGAAAGCTAAAGTAGCAGATTTTGGGTTAGCAAAGCAAGGTAATGAAGGGCAGTCTCATCTTACAACAAGGGTTGCTGGCACATATGGTTATTTGGCACCAGAGTATGCTCTATATGGTCAACTAACAGACAAAAGTGATGTCTATAGTTTTGGTATTGTGATTCTTGAGATCATGAGTGGAAGGAAAGTGCTTGATACTATGAATTCATCTGTTGTTCTAATCACAGATTGGGCATGGTCACTTGCAAAATCAGGAAATGTGGATGAAATTCTTGATCAGTCAATAGGAAAGAAGGGCCAGAAAAAATCATGGAAAGGTTTGTTCTTGTTGGGATTCTTTGTGCTCATGCATTGGTGGCTTTAA 1656 0.3986 MDKQVISYLSSCSSSPISYLMLHLPHVPWISAMLRLFLGTHQPAEVQLIHSTVAKPFLASWYRLAQHLKETFQFQLSDENTSTTCLSDFKIKLAALSIDPSLVPSCFQNSTQFVTNPSNCAGINNTQDWKQKVGMMSPLDTSCQGDMSSQTRCSICTDAGLKVTSQLNSIDPNATKCFYFSILYAAAVVNQFGPTDVGTAGCILGMPLASKGSSNRAQVLKIVFGLLGALIGVLLAFALIIMYRKWDKKRKEDLYHRNVENSVRESVLPNAGAKWFHISELEKATNKFAQKNVIGQGGDGIVYKGTLSDGTVVAVAVKEMLDLETKGDEEFCYEVEIISKIKHRNLVALRGCCVSSDNLKGKRRFLVYDFMPNGSLSYQLSLTGANRLTWPQRKNIILDVAKGLAYLHYEIKPPIYHRDIKATNILLDSKMKAKVADFGLAKQGNEGQSHLTTRVAGTYGYLAPEYALYGQLTDKSDVYSFGIVILEIMSGRKVLDTMNSSVVLITDWAWSLAKSGNVDEILDQSIGKKGQKKSWKGLFLLGFFVLMHWWL 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi366g00021 551 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 72 529 - -
Sebi366g00021 551 Gene3D Phosphorylase Kinase; domain 1 249 370 - -
Sebi366g00021 551 Pfam SPARK 63 177 IPR043891 -
Sebi366g00021 551 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 371 548 - -
Sebi366g00021 551 ProSitePatterns Serine/Threonine protein kinases active-site signature. 415 427 IPR008271 GO:0004672|GO:0006468
Sebi366g00021 551 SMART serkin_6 288 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi366g00021 551 SUPERFAMILY Protein kinase-like (PK-like) 267 526 IPR011009 -
Sebi366g00021 551 Pfam Protein tyrosine and serine/threonine kinase 291 501 IPR001245 GO:0004672|GO:0006468
Sebi366g00021 551 ProSiteProfiles Protein kinase domain profile. 288 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi366g00021 551 FunFam Receptor-like serine/threonine-protein kinase At4g25390 253 370 - -
Sebi366g00021 551 Gene3D Transferase(Phosphotransferase) domain 1 371 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi366g00021 Sebi-Chr366 661395 663050 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi366g00021 64 526 Receptor kinase-like Gene Family AT1G11050 51.374 9.35e-154 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Sebi366g00021 PK_Tyr_Ser-Thr 1.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi366g00021 - - mtr:25482441 772.311