Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi366g00020 ATGGCTATTATAAGGGTTCAATGGTTCCCAAAACAAGTGTTTGGATCTATCACGGATCCAAAAATGGATAAGCAATTGATTCTCCTCTCCCTCTTCATGTCCCTCTTCACCAATTCCATATCTAATGCTGCATCTTCCTCATGTCCCATGGATCTCAGCTATGTTGAGACCTTTCCTTGGGACACTTCAACCTGCAGATCTCCAATTGATACACAACACTGTTGCCAAACCCTTCTCAGCCTCTTTGGCATAGGGCTTGCCCAGCACCTCAAAGAAACTTCCCTGTTTCAACTTCCTGATGAAAACACTTCCTCCACTTGCTTATCTGATTTCAAAGTCAAGCTTGCAGCTTTATCAATCCAACCATCTTTGGTCCATTCTTGCTTCCCTAACTCTGCACAATTTGTTACTAACTCTTCCAATTGTGCAGGAATTAAAACTGTTCAAGATTGGAAACAAAAGGTTGGCATAATGAGCCCATTAGAAAGGTACTGTGATGGGGACCTGAAAGATCTAACCCACTGCGACATTTGCACTGATGCTGGCCTTAAAGTGACTTCCCAGCTGAATAGTATTGACCCAAATGCCACAATGTGTTTTTACTTCACAACCTTGTATGCTGCAGCTGTTGTTAATCCGTTTGGTACAACAGATGTGAGTGCAACTAGTTGTATACTAGGCATGCAACTGTCTAGTTCAGCAGCATCAAATGGATCATCAAACAGAGGACAAGGTTTGACTCTGAAGCTAGTTTTTGCATTATTGGGTGCTGTAATTGGTGTTCTGCTTGCTTTTGCATTGATAATCATGTACAGGAAGTGGGATAAGAGAAGGAAGGAAGATCTTTATCACAGGAATATTGAAAATGGTGTCAAGGCCAGTGTTTTGCCTAATGCTGGTGCAAAATGGTTCCATATATCAGAGCTTGAAAAGGCATCAAATAGATTTGCACAGAAGAATGTGATTGGTCAAGGTGGTGATGGGATTGTGTACAAAGGGACTCTTTCAGATGGAACTGTGGTGGCAATTAAGGAAATGCTTGATTTGGACACAAAAGGGGATGAAGAGTTCTGCTATGAAGTGGAGATTATAAGCAAAATAAAGCACAGGAATCTTGTTGCTCTTAGGGGTTGTTGTGTTTCAAGTGATAATTTGAAAGGTAAGAGGAGGTTTTTAGTTTATGATTTTATGCCTAATGGGAACCTCAGTTACCAATTATCTCTTGTTGGAGCTAATAGGCTAATGTGGCCACAAAGGAAGAACATAGTCCTTGATGTGGCTAAGGGGCTTGCTTATTTGCATTATGAAATCAAACCCCCAATTTATCACCGTGACATAAAGGCTACTAACATACTTTTGGATTCCAAAATGAGTGCTAAATTGGCAGATTTTGGGTTGGCAAAGCAAGGTAATGAAGGGCAGTCTCATCTCACCACAAGGGTTGCTGGCACATATGGTTATGTAGCACCAGAATATGCTCTATATGGGCAACTAACAGAGAAAAGTGATGTCTATAGTTTTGGTATTGTGATTCTTGAGATCATGAGTGGAAGAAAAGTGCTTGATACTTTGAATTCATCTGTGGTTTCAATCACAGATTGGGCATGGACACTTGCAGAATCAGGGAAGATGAAGGAAATTCTTGATCAGTCAATAAGAGAAGAAGGGCCAGAAAAAATCATGGAAAGGTTTGTTCTTGTTGGAATGCTTTGTGCTCATACAATGGTGGTGTTAAGGCCTACGATAGCAGAGGCACTCAAGATGTTAGAGGGTGACATTGATATTCCTAATTTACCAGACAGGCCAGTACCACTGAGTCATGCATCGTTTCAATCTTCTCTGCTGCATAGTTTGAAAAGGGGAGAAAGATCTATACATGTTTCATCTTAG 1890 0.4085 MAIIRVQWFPKQVFGSITDPKMDKQLILLSLFMSLFTNSISNAASSSCPMDLSYVETFPWDTSTCRSPIDTQHCCQTLLSLFGIGLAQHLKETSLFQLPDENTSSTCLSDFKVKLAALSIQPSLVHSCFPNSAQFVTNSSNCAGIKTVQDWKQKVGIMSPLERYCDGDLKDLTHCDICTDAGLKVTSQLNSIDPNATMCFYFTTLYAAAVVNPFGTTDVSATSCILGMQLSSSAASNGSSNRGQGLTLKLVFALLGAVIGVLLAFALIIMYRKWDKRRKEDLYHRNIENGVKASVLPNAGAKWFHISELEKASNRFAQKNVIGQGGDGIVYKGTLSDGTVVAIKEMLDLDTKGDEEFCYEVEIISKIKHRNLVALRGCCVSSDNLKGKRRFLVYDFMPNGNLSYQLSLVGANRLMWPQRKNIVLDVAKGLAYLHYEIKPPIYHRDIKATNILLDSKMSAKLADFGLAKQGNEGQSHLTTRVAGTYGYVAPEYALYGQLTEKSDVYSFGIVILEIMSGRKVLDTLNSSVVSITDWAWTLAESGKMKEILDQSIREEGPEKIMERFVLVGMLCAHTMVVLRPTIAEALKMLEGDIDIPNLPDRPVPLSHASFQSSLLHSLKRGERSIHVSS 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi366g00020 629 Gene3D Phosphorylase Kinase; domain 1 279 396 - -
Sebi366g00020 629 ProSiteProfiles Protein kinase domain profile. 316 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi366g00020 629 Pfam SPARK 43 199 IPR043891 -
Sebi366g00020 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 441 453 IPR008271 GO:0004672|GO:0006468
Sebi366g00020 629 Gene3D Transferase(Phosphotransferase) domain 1 397 595 - -
Sebi366g00020 629 PANTHER OS01G0750732 PROTEIN 65 602 - -
Sebi366g00020 629 SUPERFAMILY Protein kinase-like (PK-like) 301 608 IPR011009 -
Sebi366g00020 629 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 397 597 - -
Sebi366g00020 629 Pfam Protein kinase domain 317 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi366g00020 629 CDD STKc_IRAK 322 591 - -
Sebi366g00020 629 SMART serkin_6 316 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi366g00020 629 FunFam Receptor-like serine/threonine-protein kinase At4g25390 281 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi366g00020 Sebi-Chr366 599271 601160 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi366g00020 37 611 Receptor kinase-like Gene Family AT1G11050 51.597 0.0 583
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Sebi366g00020 Pkinase 1.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi366g00020 - - gmx:100820563 937.562