Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi366g00012 ATGTCAACACAGAATCGCTGTCATTCGTCGTTTTCTTCCTCAACGACGTCGTCTCTCGCGAAACGAAATCCATCGTCGTCGTCGACGTTGGCTAAGAAGAGAGCGCCTCTCACCAACCTCACCAATCAGAGGAATGCGCTGCACGCTCCTTCCCGCAACTCGGGTCCTTCCTCTACATTGGTACCACCATGTTCAACTAAAATTGCCAAGAGCAAGAAAGGGTCTCCTGTCTGCACCAGCATCACTAGGTCAGCAAGTTGCGGGAACAAATTGCAGAATGTGAAACCAAGTGTAGTTGTTTTTCCAAAGGCTACTTCTGTCCCACAAAAGAATGTTGCTGCTCCCACAGTTGCCACTGTCCCTTTGCCTGTTCCAACCATGAAGGATGTTACTCCTTGTGAATCATCAGATGCAATGTCCATTTCTATGGATGACAGTACAGTGTCTTCTTGTGGTTCTATCAAGAGTCCTGAGGTTGTATACCTGGACAACAGTGAGATTTCAGCTGTTGATTCAATTCAGAGAAAGATATTCAGCAATTTGAACATATCTGATACTACAGAGCCTGCAGGTAACATCTATAGTAAAGACATAATTGTTGGGTTGGAAAGAGAGGATAAGGTTGCTGATATTGATGATAATTACACGGATCCGCAGCTTTGTGCAACCTATGCCTGTGACATCTACAAGCACCTTCGTGCATCTGAGGCAAAGAAAATGCCTTCCCCAGACTTCATGGAGAGATTTCAGAAGGACATAAATGTCAGCATGCGCGCTATATTGATTGACTGGCTTGTGGAGGTGGCTGAGGAGTATAGGCTTGTACCTGATACCTTGTATTTGACAGTGAACTACATAGATCGGTATCTTTCAGGGAATGCAATGAATAGGCAAAAATTACAATTACTTGGTGTTGCGTGCATGATGATTGCCTCTAAATATGAGGAGATTTGTGCACCTCAGGTAGAGGAATTTTGTTTTATAACTGATAACACGTACGTCAAAGAAGAGGTTTTGCGAATGGAATCTGCTGTCTTGAATTGTCTTAAGTTTGAAATGACAGCCCCAACAACAAAATGTTTCTTAAGACGATTTGTTCGTGCAGCTCAAGATGTCAACGAGGTCCCTTCACTGCAACTAGAGTGCTTGACCAACTATATTGCCGAATTATCTCTCTTGGAGTACAGTATGCTTTGTTATGCACCATCACTGATAGCAGCTTCTTCAATTTTCCTGGCCAAATTTATACTTTTCCCTTCAAAAAAACCATGGAATTCCACATTGCAGCATTACACTCTCTATCGGCCTTCTGATTTGTGTGGATGTGTAAAGGATCTCCATCGTCTTTGTCGCAACAGCCCTGGCTCTAATTTACCTGCAATCCGAGAGAAATACAGTCAACATAAGTACAAATATGTGGCGAAAAAGTGCTTTCCTCCTTCAATACCTCAAGATGTTTTCCAAAATTGA 1470 0.4293 MSTQNRCHSSFSSSTTSSLAKRNPSSSSTLAKKRAPLTNLTNQRNALHAPSRNSGPSSTLVPPCSTKIAKSKKGSPVCTSITRSASCGNKLQNVKPSVVVFPKATSVPQKNVAAPTVATVPLPVPTMKDVTPCESSDAMSISMDDSTVSSCGSIKSPEVVYLDNSEISAVDSIQRKIFSNLNISDTTEPAGNIYSKDIIVGLEREDKVADIDDNYTDPQLCATYACDIYKHLRASEAKKMPSPDFMERFQKDINVSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNAMNRQKLQLLGVACMMIASKYEEICAPQVEEFCFITDNTYVKEEVLRMESAVLNCLKFEMTAPTTKCFLRRFVRAAQDVNEVPSLQLECLTNYIAELSLLEYSMLCYAPSLIAASSIFLAKFILFPSKKPWNSTLQHYTLYRPSDLCGCVKDLHRLCRNSPGSNLPAIREKYSQHKYKYVAKKCFPPSIPQDVFQN 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi366g00012 489 CDD CYCLIN_AtCycA-like_rpt2 356 470 - -
Sebi366g00012 489 SMART cyclin_7 263 347 IPR013763 -
Sebi366g00012 489 SMART cyclin_7 360 448 IPR013763 -
Sebi366g00012 489 SUPERFAMILY Cyclin-like 216 353 IPR036915 -
Sebi366g00012 489 Gene3D - 227 475 - -
Sebi366g00012 489 SMART Cyclin_C_2 356 479 IPR004367 -
Sebi366g00012 489 Pfam Cyclin, C-terminal domain 356 476 IPR004367 -
Sebi366g00012 489 FunFam Cyclin A1 343 475 - -
Sebi366g00012 489 ProSitePatterns Cyclins signature. 258 289 IPR006671 -
Sebi366g00012 489 FunFam Mitotic cyclin 6 241 341 - -
Sebi366g00012 489 Gene3D - 241 354 - -
Sebi366g00012 489 PIRSF Cyclin_A_B_D_E 1 485 IPR046965 GO:0016538|GO:0044772
Sebi366g00012 489 MobiDBLite consensus disorder prediction 1 65 - -
Sebi366g00012 489 Pfam Cyclin, N-terminal domain 227 353 IPR006671 -
Sebi366g00012 489 PANTHER CYCLINS 175 467 IPR039361 -
Sebi366g00012 489 SUPERFAMILY Cyclin-like 356 480 IPR036915 -
Sebi366g00012 489 CDD CYCLIN_AtCycA_like_rpt1 217 352 - -
Sebi366g00012 489 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi366g00012 Sebi-Chr366 284462 288179 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi366g00012 19 489 Core Cell Cycle Gene Families AT1G44110 58.628 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi366g00012 K06627 - gmx:547781 655.595