Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi364g00026 ATGTCAGCATGGGAGAAGGAAGAAGAAGCAAAAGAGGCACATGCACAAGTTGATATATGGAAAATCATATGTGGATTTGTGGAAATGGCAGCGGTGAAATGTGCCATTGAACTTGGCATACCTGAAGCCATTGAAAAGCACGGAAGCCCCATGACACTATTGGAGCTATCATCTACACTTGGATGTGATCCTTCATATCTTAACCGCATCATGAGGTTCTTAGTGAACCGAAAGATCTTCAAAATCATACCCATCAAACATGACTCTCTAGGCTATGCTCACACACCATTGTCTCGCTGTTTGATGAGAAATGGTGAACATAGCATGGCTTCTTTAATTTTGATGGAGACTAGTCCCATAATGCTAGCACCTTGGCATTGTCTAAGTGCTCGTGTTTTGGTTAATGGCAATCCCTCATTTGAAAATGTTTACGGTGAAGATCTATGGCAGTATACTGCGGAAAATCTTGATCATAGCAAGCTCTTCAATGAAGCTATGGCATGTGATGCTAAGTTTGTTGTGCCTGCTATTATTGAAGGTTGTAGAGAAGCATTTGATGGTGTTAGCACCTTGGTAGATGTGGGTGGAGGGAATGGCACCACCTCCCGCATCCTTGCTAAGGCTTGCCCTCGGATTCAATTGACCAATTTTGATCTTCCTCATGTCATTGCTGCAGCCCCAAAGTGCAATGGAGTGGAACATGTAGCTGGTGACATGTTTCAAAGTGTTCCCAAAGCTGATGCTGTATTTATTAAGTGGATTTTGCATGACTGGGGTGATAAAGAGTGCATCCAAATCTTAAAGAAGTGTAGAGAAGCTATTCCAAAGGAAAACGGAAGGGTTATTATTGTGGAAGCGGTGATTGAAGAAGGAGAAGAAAAACGTGACAAGTTCAAAGATATAGGATTACTACTGGACATGGTGATGATGGCACACACTAGTTTAGGCAAAGAAAGGACACTAAAAGAGTGGGACTATGTGATTAAAATGGCTGGATTTAGTGCATACACCCTGAAAGCTATCAATGCTGTGCAGTCTCGGCGCGGCCACCCTTATTCCGGCACCCTGAGAGCGGCGCGGCCACCGTTCTTCCGTCCGATTGTCACAGAAGCGCGGAGCGGCCTTCCATCACCAGTTCAGACCTTCACAGAAGCGCGGCGCATCCCTCGTTCGTCCGTCAGGAAGCGCGGCGCGGCCCTCACATCGTCGGCGTCGTCGTTCTTCGAGTCGAGACCTCCGTTCCTCGTCGTTCCTTGTCCCCTGTTCTCCTCTGTTCTCGGCCGGCCACCGTCGTTAAGGGTTCTCCCGTGTCTTCAGAGCTGGATTGGAGTTCAGAGTTGGACCGGAGCTCGTCTGTGTCTTCATCTTGGAGAGTTGTGTCTTCATTGA 1389 0.4701 MSAWEKEEEAKEAHAQVDIWKIICGFVEMAAVKCAIELGIPEAIEKHGSPMTLLELSSTLGCDPSYLNRIMRFLVNRKIFKIIPIKHDSLGYAHTPLSRCLMRNGEHSMASLILMETSPIMLAPWHCLSARVLVNGNPSFENVYGEDLWQYTAENLDHSKLFNEAMACDAKFVVPAIIEGCREAFDGVSTLVDVGGGNGTTSRILAKACPRIQLTNFDLPHVIAAAPKCNGVEHVAGDMFQSVPKADAVFIKWILHDWGDKECIQILKKCREAIPKENGRVIIVEAVIEEGEEKRDKFKDIGLLLDMVMMAHTSLGKERTLKEWDYVIKMAGFSAYTLKAINAVQSRRGHPYSGTLRAARPPFFRPIVTEARSGLPSPVQTFTEARRIPRSSVRKRGAALTSSASSFFESRPPFLVVPCPLFSSVLGRPPSLRVLPCLQSWIGVQSWTGARLCLHLGELCLH 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi364g00026 462 Gene3D Vaccinia Virus protein VP39 103 346 IPR029063 -
Sebi364g00026 462 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 360 IPR016461 GO:0008168
Sebi364g00026 462 CDD AdoMet_MTases 190 284 - -
Sebi364g00026 462 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 106 338 IPR029063 -
Sebi364g00026 462 FunFam O-methyltransferase family protein 103 347 - -
Sebi364g00026 462 Gene3D - 2 101 IPR036388 -
Sebi364g00026 462 FunFam O-methyltransferase family protein 3 101 - -
Sebi364g00026 462 SUPERFAMILY "Winged helix" DNA-binding domain 11 105 IPR036390 -
Sebi364g00026 462 Pfam O-methyltransferase domain 125 334 IPR001077 GO:0008171
Sebi364g00026 462 Pfam Dimerisation domain 31 75 IPR012967 GO:0046983
Sebi364g00026 462 PANTHER O-METHYLTRANSFERASE 29 335 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi364g00026 Sebi-Chr364 842118 942865 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi364g00026 31 335 Monolignol Biosynthesis Gene Families AT5G54160 37.261 3.85e-64 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi364g00026 K22588 - gmx:100782951 473.781