Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi364g00013 ATGGCGGGAAACCATTTTCCTGTGGGTACGTGTGTTCTTGCTGTTGACGGCGACCAAACTGGTCTAAAAGTGTTGGAGAACCTGCTTCGCAAATGCCAGTATCATGTTACTACAACTACTCAGACAATTGAGGCTCGAGAAATGTTGAAGAAAAACCGAAATGAGTTTGAGCTTGTTATTAGTGATGTAAATATGACAGATATGGACCATTTCAAATTTTTTGAACAAGTGGTACTTGAAATGGACTTACCAATAATCAGTAAAAAGACGAAGAAACAAAGTGAGCGAAAGGAACACCATGATAAAGAGAATGGAGGGAAGAATGAGGAAGCCTCAACTTGGAAGAAGCCTCATTTAGTTTGGACTGCTGAACTGCATAAAAAATTTGTTTACGCAGTCAATCAACTTGGACTCAATAGCATTATTGGCTTCTAA 435 0.3908 MAGNHFPVGTCVLAVDGDQTGLKVLENLLRKCQYHVTTTTQTIEAREMLKKNRNEFELVISDVNMTDMDHFKFFEQVVLEMDLPIISKKTKKQSERKEHHDKENGGKNEEASTWKKPHLVWTAELHKKFVYAVNQLGLNSIIGF 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi364g00013 144 ProSiteProfiles Response regulatory domain profile. 11 127 IPR001789 GO:0000160
Sebi364g00013 144 Gene3D - 11 111 - -
Sebi364g00013 144 PANTHER TWO-COMPONENT RESPONSE REGULATOR 12 90 IPR045279 GO:0009736
Sebi364g00013 144 SUPERFAMILY CheY-like 11 86 IPR011006 -
Sebi364g00013 144 Gene3D - 113 142 - -
Sebi364g00013 144 Pfam Response regulator receiver domain 12 87 IPR001789 GO:0000160
Sebi364g00013 144 MobiDBLite consensus disorder prediction 89 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi364g00013 Sebi-Chr364 360597 361820 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi364g00013 2 86 Response Regulator Gene Family AT2G25180 65.882 2.65e-31 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sebi364g00013 Response_reg 3.3e-08 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi364g00013 - K14491 gra:105770301 133.265