Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi364g00012 ATGGCGGGGAAAGATGTTCAAAGTATCATCACATCATACAACAATCCTGACCATAATAAACTGGTAGGTAAAAAGAGGAAGAAACAAAGTGAGCAAAAGGAACACCATGATAAAGAGAATGTAGGGAAGAATGATGAAGCCTCAATTAGGAAGAAGCCTCGTTTAGTTTGGACTGCTGAACTGCATAGAAAATTTGTTTACACAGTCAATCAACATGGACTCAATAAGGCTTATCCAAGGAGATTATTAGAGTTGATGAATATTGAAGGGCTTACAAAAGAACACGTAGCAAGCCATCTCCAGAGTTGGATCAAAGAATATGGAGATTTTGGAACCCTATTTGAATCAAGAAGAATTTTAGAAAACAAACTCCCATCATATGGATCCTATGGAACATGCAAGATGAACTCTCCCTATGGTATGAACTTATCAAGAATGAATTCGTTTGTTCCGTCTCAGAACATTCTCACCTCCACAGAAACACAGAATTCAGAAGTATTTCATTCTTCTGTTGAGGCTTCTTTGGTCAATGTTGAATCTGTTGACACTGACATTTGTGCTGATTTATTAGAGTATTGGCCTAATGAAGCTTGGAGCGAGACTCAGACTCAGTTATCTAACTTTTCTGTTCATTCATCTTCATCGAGTGAGGTTTTAAACAATGATCAACATACTCACGATTCTTTGAACTTTTCCTCCTCCATTTTTCCTAGTGAGAAATCTACAGTAGATTTTTCTTCCCAAAGTGACGTTACTGATTTTTAG 765 0.3712 MAGKDVQSIITSYNNPDHNKLVGKKRKKQSEQKEHHDKENVGKNDEASIRKKPRLVWTAELHRKFVYTVNQHGLNKAYPRRLLELMNIEGLTKEHVASHLQSWIKEYGDFGTLFESRRILENKLPSYGSYGTCKMNSPYGMNLSRMNSFVPSQNILTSTETQNSEVFHSSVEASLVNVESVDTDICADLLEYWPNEAWSETQTQLSNFSVHSSSSSEVLNNDQHTHDSLNFSSSIFPSEKSTVDFSSQSDVTDF 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi364g00012 254 MobiDBLite consensus disorder prediction 1 47 - -
Sebi364g00012 254 NCBIfam myb-like DNA-binding domain, SHAQKYF class 52 102 IPR006447 GO:0003677
Sebi364g00012 254 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 24 209 IPR044841 GO:0003700|GO:0006355
Sebi364g00012 254 MobiDBLite consensus disorder prediction 27 47 - -
Sebi364g00012 254 SUPERFAMILY Homeodomain-like 50 103 IPR009057 -
Sebi364g00012 254 Gene3D - 48 107 - -
Sebi364g00012 254 FunFam Two-component response regulator 48 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi364g00012 Sebi-Chr364 356364 357536 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi364g00012 26 103 Response Regulator Gene Family AT3G16857 51.282 2.38e-20 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sebi364g00012 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi364g00012 K14491 - gmx:100776075 132.109