Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi364g00009 ATGGGAATCGATGAAGCTGGAAGAGGCCCTGTTCTAGATTCTAAAATACTAAAAGAAGAGAAGAGGGAAGAGTTATTTGAAGCTTTAAAAGCCAATGATTCTATTGGATGGGCTGTTGATGTCATTGACCCAAGGGAGCTCTCTGCTAAAATGCTCAAGAAGAATAAGATAAACTTGAATGAGATATCACATGACTCTGCAATGGGCCTCATCGATAGGGTACTAAAGATGGGAGTGCTTCTAACCGAGGTGCTTGTGGGCATTTATGCTGTTATAACTAGGAAATTGCTAGCATCTCCTAGTTCCTCTCAACAATTCTTTAGCATCTGCAACTGTAGTTAA 342 0.4035 MGIDEAGRGPVLDSKILKEEKREELFEALKANDSIGWAVDVIDPRELSAKMLKKNKINLNEISHDSAMGLIDRVLKMGVLLTEVLVGIYAVITRKLLASPSSSQQFFSICNCS 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi364g00009 113 ProSiteProfiles Ribonuclease (RNase) H type-2 domain profile. 1 113 IPR024567 GO:0004523
Sebi364g00009 113 Gene3D - 11 108 IPR036397 GO:0003676
Sebi364g00009 113 Pfam Ribonuclease HII 12 87 IPR024567 GO:0004523
Sebi364g00009 113 PANTHER RIBONUCLEASE H2 SUBUNIT A 12 86 IPR001352 GO:0003723|GO:0004523
Sebi364g00009 113 SUPERFAMILY Ribonuclease H-like 1 86 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi364g00009 Sebi-Chr364 274029 275103 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi364g00009 1 86 Core DNA Replication Machinery Family AT2G25100 50.000 6.53e-23 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi364g00009 K10743 - psat:127135270 144.821