Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi362g00075 ATGGATCCAGTATCTGCTGATGTGTCTAATTCACCACCTGTTAAAGTTCCATCTACTGCACCTCCTGCTAAAGAGGCTGATGGACAAGCTTCAGCTGCTGTTGCCTCTGGACAAGATAATTCTGCCCCTGAGGCACCATCTAGGCTAAATCCCACTGGCATATCATCTTGGGCCAAAAATTTGAAAATTTCTCAATCATTTTCTGGCTCCCAAGATGACTCATCAAGTGGAAATGTTGGGAAATCAGCTTTTGCACGCCTCACTAGTAATTTGGGATTGCGGTTGTCTCCAAAATCTCCTGTGGCAGATGACAGTTCCAATGAAACAACAGCACAATCTAATTTGTTTGGAAGTATTACAAAAGGCCTGGTTGACTCTTCTAAGAATGCTGTAAAAGCTGTACAGGTTAAAGCACGGCATGTTGTTTCTCAGAATAAACGCAGATACCAGGAAGGAGGTTTTGATTTAGATATGACATATATCACAGAAAACATTATTGCAATGGGATTCCCTGCTGGTGACATGAGCTCTGGCTTTTTTGGTTATGTTGAAGGATTTTACCGAAATCACATGGAAGAAGTGATTAAGTTTTTTGAGACTCACCATAAGGGTAAATACAAAGTATATAATCTCTGTTCTGAGAGGCTGTATGATGCATCATTGTTTGAGGGGAAGGTTGCTAGCTTCCCATTTGATGACCATAATTGCCCACCAATTCAACTGATTACATCATTTTGTCAAAGTGCATACTCATGGTTGAAAGAAGACATTGAGAATGTTGTGGTTGTTCACTGTAAGGCTGGAATGGCGAGGACAGGGTTGATGATTTCTAGCCTTCTATTATTCTTAAAGTTCTTCCCAACTGCTGAGGAGTCAATGGATTACTATAATCAGAAAAGATGTATTGATGGAAAAGGACTTGTTCTGCCTAGTCAGATTAGGTATGTCAAATATTTTGAACGGGTGTTGACATACTTTAATGGCGAAATCCCACCTGCCCGCAGGTGCATGCTTAGGGGATTCAGGCTTCACAGATGCCCTTACTGGATTAGGCCCTCTATAACTGTCTCTGATCATAGAGGTGTGTTGTTCTCAACCAAAAAGCATCCGAGAACAAAAGATCTTTTGCCAGAAGATTTTTGGTTTAGTGCACCAAAGAAGGGAGTGATGGTCTTTGCTTTGCCTGGAGAGCCTGGTCTTACAGAGTTGGCTGGGGACTTCAAAATCCATTTTCATGATCGCCAAGGAGATTTTTACTGTTGGTTGAACACAACAATGACAGAAAATAGGAAAATTTTGAACACCAGTGATCTCGATGGCTTTGACAAGAGAAAATTGCCTTCTCCAGGATTCCTGGTTGAGGTTGTGCTTGTGGATTATAATGATAATGTTGCAACTTCCAAACCTGAAACTATTACAAAGAAATCAGATGAGAGTTCTAGTAACAGTCCAGCCAGTCCCACCCAAGTTGAAGTGAGCTCCCCTGTGTTGAATGCGGACAAAGAGTCAGGGGGTCATGATAAAGATGATGTGTTTTCAGATGGTGAGGCAGAGCATCCTGCTTCTTCAAGAAGCAAGCAAACAAAAGCATCTTCTGAAGCAGTTGAAACAGTTGCAAATGCAACCAGAGAGTCTGAGTCAAACAAAAATTCAAATCAAATTGCAAATTTAACAAATGCAACAGAACAAGTTTCTCTAGGAAATAAGATCTCTGCGCCAATTCATAGTGCTGGTGAGCCAAAAAGTGATGTTGATGGAAGAACAGTGTCCAGCTCAGAAAGTGAGTTTAAGGCCATGGCTGCAGATGCTTCCGTTTTTACTTTCGGAGATGATGAAGATTACGAAAGTGATTGA 1854 0.4126 MDPVSADVSNSPPVKVPSTAPPAKEADGQASAAVASGQDNSAPEAPSRLNPTGISSWAKNLKISQSFSGSQDDSSSGNVGKSAFARLTSNLGLRLSPKSPVADDSSNETTAQSNLFGSITKGLVDSSKNAVKAVQVKARHVVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGFYRNHMEEVIKFFETHHKGKYKVYNLCSERLYDASLFEGKVASFPFDDHNCPPIQLITSFCQSAYSWLKEDIENVVVVHCKAGMARTGLMISSLLLFLKFFPTAEESMDYYNQKRCIDGKGLVLPSQIRYVKYFERVLTYFNGEIPPARRCMLRGFRLHRCPYWIRPSITVSDHRGVLFSTKKHPRTKDLLPEDFWFSAPKKGVMVFALPGEPGLTELAGDFKIHFHDRQGDFYCWLNTTMTENRKILNTSDLDGFDKRKLPSPGFLVEVVLVDYNDNVATSKPETITKKSDESSSNSPASPTQVEVSSPVLNADKESGGHDKDDVFSDGEAEHPASSRSKQTKASSEAVETVANATRESESNKNSNQIANLTNATEQVSLGNKISAPIHSAGEPKSDVDGRTVSSSESEFKAMAADASVFTFGDDEDYESD 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi362g00075 617 ProSiteProfiles Phosphatase tensin-type domain profile. 147 326 IPR029023 -
Sebi362g00075 617 MobiDBLite consensus disorder prediction 468 588 - -
Sebi362g00075 617 MobiDBLite consensus disorder prediction 524 570 - -
Sebi362g00075 617 MobiDBLite consensus disorder prediction 501 523 - -
Sebi362g00075 617 ProSitePatterns Tyrosine specific protein phosphatases active site. 263 273 IPR016130 GO:0016311|GO:0016791
Sebi362g00075 617 SMART PTEN_C2_2 331 459 IPR014020 -
Sebi362g00075 617 ProSiteProfiles C2 tensin-type domain profile. 333 460 IPR014020 -
Sebi362g00075 617 MobiDBLite consensus disorder prediction 1 53 - -
Sebi362g00075 617 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 160 328 IPR029021 -
Sebi362g00075 617 Gene3D Protein tyrosine phosphatase superfamily 132 329 IPR029021 -
Sebi362g00075 617 MobiDBLite consensus disorder prediction 468 496 - -
Sebi362g00075 617 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 132 329 - -
Sebi362g00075 617 MobiDBLite consensus disorder prediction 33 53 - -
Sebi362g00075 617 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 261 300 IPR000387 GO:0016311|GO:0016791
Sebi362g00075 617 CDD PTP_PTEN 157 321 IPR045101 GO:0016791
Sebi362g00075 617 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 124 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi362g00075 Sebi-Chr362 1003260 1008093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi362g00075 19 617 Protein tyrosine phosphatase (PTP) family AT3G19420 69.394 0.0 855
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi362g00075 K01110 - gmx:100784003 1071.23