Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi362g00045 ATGATGATCAAGGAAGATGAAGCAACTCTTACAACAGCCAAGGAACAAGCAGGTGAAGTGATGAACAGAGACAAGAACAATGAGGGAAGCGAAGAAGACAATCCAGAAGAGTGGTTGAACCTCAGCTTAGGAGGCACTTCACTCTCAACAGCAGGAGACTCTGATTCACAATCAAGACCAGCTACTGCCAAAGTTTTTTCATGCAACTTTTGCATGAGGAAGTTCTTTAGTTCACAAGCATTAGGAGGTCATCAGAACGCTCACAAAAGGGAAAGAGGTGCAGCCAGAAGATATCAATCTCAGAGGACGATGGCACTAATGGGCTTGTCCATGAACAATCCTATGCTTCGATCACTTGGTGTCCAGCCTCATTCACTCGTGCACAAGCCATGCAGAGGTGGAACTATGATGGCACCGAGCTTTCATGAAGCATATGTAGCAGGACTTGGAACGGCATGGACAACCTTAGCCTCAGAGGATCAAACGGATCTGGTGTGGCCAGGCAGCTTTCGTTTGGTTCCACAACAGCCCGAGCCACCACCTCAGCAGTCACTCAAGCTTGATTTAGACCTCAGACTCTGA 582 0.4759 MMIKEDEATLTTAKEQAGEVMNRDKNNEGSEEDNPEEWLNLSLGGTSLSTAGDSDSQSRPATAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAARRYQSQRTMALMGLSMNNPMLRSLGVQPHSLVHKPCRGGTMMAPSFHEAYVAGLGTAWTTLASEDQTDLVWPGSFRLVPQQPEPPPQQSLKLDLDLRL 193
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sebi362g00045 193 SUPERFAMILY beta-beta-alpha zinc fingers 63 92 IPR036236 -
Sebi362g00045 193 MobiDBLite consensus disorder prediction 1 59 - -
Sebi362g00045 193 MobiDBLite consensus disorder prediction 1 32 - -
Sebi362g00045 193 PANTHER ZINC FINGER PROTEIN 4-LIKE 2 193 - -
Sebi362g00045 193 ProSitePatterns Zinc finger C2H2 type domain signature. 68 88 IPR013087 -
Sebi362g00045 193 Gene3D Classic Zinc Finger 49 112 - -
Sebi362g00045 193 MobiDBLite consensus disorder prediction 40 59 - -
Sebi362g00045 193 ProSiteProfiles Zinc finger C2H2 type domain profile. 66 93 IPR013087 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Sebi362g00045 Sebi-Chr362 642579 643160 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi362g00045 2 180 C2H2 Transcription Factor Family AT1G24625 36.066 7.73e-24 92.0
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi362g00045 - - gmx:100811125 265.003