Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi362g00009 ATGTCGAACATGAGCGATGAGAGGGTTATGAGGCGACACATTGGTAGGAAGGGAAGCGGCGCAAGAACATGGCTGGTGTTGGGCGGCGCCGGGAAGAAACAGGTGGTGGACGCCGCAAGACACCTCATAATGCAGCGGACAGGACTTACCGCTCGGGACCTTCGGATCCTTGACCCCTTGCTGTCTTACCCTTCCACCATTGCAGGGCGTGACAGAGCCATCGTCATCAGCTTGGAACACATCAAGGCTATCATCACTGCCCAAGAGGTTCTCTTGCTCAATTCCAGGGACCCCTTTGTTACCCCTTTTGTTGACGACCTTCATGCACGGATTCTTCGTCACCACAGTGCCACTCAGACTCAAACTCAGAGTCAAGATCGGAAGAAGAAGGACAAAGATGAAACAAAGCAAGATAGCAGCATCAAGATTTTCCCTTTTGAGTTTGTAGCACTCGAGGCATGCCTTGAGGAAGCTTGTAGTGTCTTAGAAAATGATGCAAAGATATTGGAGCAGGAGGCTCATAATGCCTTAGATAATCTGACTTCAAAGATTAGTACTCTCAATTTGGAATGCGTTCGCCATGTTAAGAGCCGCTTAGCTGCCTTAACCGCTCGTGCTCAAAGGGTAAGGGATGAATTAGAGAACTTGCTGGATGATGATGAAGGTATGGCTGAGCTCTATCTCACAGAAAAGTTAGTTCAACATCACCTTGAAAGTTGTTCTGCCTCATCCATGAATGACTGGGATGACATGGAGAATCGAGTTCTTCAACCAGATATGAATCACAGGATTCCTCCTGAAATATCATTGGAACGTGGTGGAGATTCTACAAGGGATGATGAAGAAGATCATCAAAATGCTGCTGATTACTCCAGCAACCAAGTATTAGCTAGTGGATCTAATAGAGTTGGCAGCGAAATCCATGACCATGAGACCCAAGCAGGAACTACCCACACTGCTTTAACCAAGAACAATAATGTGGAGGAGGTTGAGATGCTTTTGGGAGCATACTTTGTACAAATCGGTGGCACACTCAACAAACTATCAACGCTGAAGGAGTACGTGGATGATACAGAGGATTACATAAACATTACCCTGGATGACAAACAGAACCAAATCTTGCAAACGGGAGTGAAGGTGGGCACAGCAAGTGTGCTTGTGAATGCGTTTGTTGTGGTGACGGGTGTTTTTGGAATGAATATTCACATTGAGCTATTTGATAGTGGGATGCCACAGTTCCTGGGGGTTATTTTCGGATGCACCGCTTCTTGCATATTCTTGTACATCGTTGCCATGATCTGGTACAACTACAAGCGCTTGCTCGAATAG 1329 0.4643 MSNMSDERVMRRHIGRKGSGARTWLVLGGAGKKQVVDAARHLIMQRTGLTARDLRILDPLLSYPSTIAGRDRAIVISLEHIKAIITAQEVLLLNSRDPFVTPFVDDLHARILRHHSATQTQTQSQDRKKKDKDETKQDSSIKIFPFEFVALEACLEEACSVLENDAKILEQEAHNALDNLTSKISTLNLECVRHVKSRLAALTARAQRVRDELENLLDDDEGMAELYLTEKLVQHHLESCSASSMNDWDDMENRVLQPDMNHRIPPEISLERGGDSTRDDEEDHQNAADYSSNQVLASGSNRVGSEIHDHETQAGTTHTALTKNNNVEEVEMLLGAYFVQIGGTLNKLSTLKEYVDDTEDYINITLDDKQNQILQTGVKVGTASVLVNAFVVVTGVFGMNIHIELFDSGMPQFLGVIFGCTASCIFLYIVAMIWYNYKRLLE 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi362g00009 442 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 13 441 IPR039204 -
Sebi362g00009 442 Gene3D - 8 95 - -
Sebi362g00009 442 Coils Coil 152 190 - -
Sebi362g00009 442 MobiDBLite consensus disorder prediction 265 287 - -
Sebi362g00009 442 Coils Coil 192 219 - -
Sebi362g00009 442 FunFam Magnesium transporter MRS2-1 12 95 - -
Sebi362g00009 442 CDD Mrs2_Mfm1p-like 24 440 IPR039204 -
Sebi362g00009 442 Gene3D Magnesium transport protein CorA, transmembrane region 101 373 - -
Sebi362g00009 442 MobiDBLite consensus disorder prediction 262 295 - -
Sebi362g00009 442 MobiDBLite consensus disorder prediction 115 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi362g00009 Sebi-Chr362 102669 104576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi362g00009 23 442 MRS2 Gene Family AT3G19640 53.556 3.10e-149 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi362g00009 - - ccaj:109817554 486.878