Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi361g00051 ATGGAAGCAATGAATAGAAGCTCTTCCTCCACCACGTCTTCTTCGGATTCTTCCTCTTCAGAGTCTAATCCAAGGAATCCTAACAAACTTGATAGAATCAAAGGCCCATGGAGCGCTGAAGAAGACAGGATCCTGACCCGACTCGTAGAGCAACACGGGGCCCGAAATTGGTCCTTAATTAGCCGTTACATAAAAGGAAGATCCGGCAAGTCGTGCAGGCTTCGGTGGTGTAATCAGCTGAGCCCCACCGTGGAGCACCGTCCATTCTCCGCTGAAGAGGATGAAATCATTATAGCTGCTCATGCTCAATACGGTAACCGGTGGGCCACCATTGCCCGGTTACTACCGGGTCGAACCGATAATGCTGTAAAGAACCACTGGAACTCGACGCTGAAACGAAGGGCGAGTGGGAGTGGGTGTGGTTCTGTTGTTGTAACTGCCAATGAGGGGCCCACAGCCACTTGTTCTGGTGGTGTTCACCCTTGCATGCCGTTGGAAGATGATCCGTTGACCCGCGTTGACTCTGGCTCCGCCGGGAATTGGTAA 546 0.522 MEAMNRSSSSTTSSSDSSSSESNPRNPNKLDRIKGPWSAEEDRILTRLVEQHGARNWSLISRYIKGRSGKSCRLRWCNQLSPTVEHRPFSAEEDEIIIAAHAQYGNRWATIARLLPGRTDNAVKNHWNSTLKRRASGSGCGSVVVTANEGPTATCSGGVHPCMPLEDDPLTRVDSGSAGNW 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi361g00051 181 ProSiteProfiles Myb-like domain profile. 29 80 IPR001005 -
Sebi361g00051 181 FunFam MYB transcription factor 34 85 - -
Sebi361g00051 181 ProSiteProfiles Myb-like domain profile. 81 131 IPR001005 -
Sebi361g00051 181 SUPERFAMILY Homeodomain-like 31 127 IPR009057 -
Sebi361g00051 181 Gene3D - 88 134 - -
Sebi361g00051 181 Gene3D - 33 85 - -
Sebi361g00051 181 MobiDBLite consensus disorder prediction 1 26 - -
Sebi361g00051 181 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 81 135 IPR017930 -
Sebi361g00051 181 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 29 80 IPR017930 -
Sebi361g00051 181 CDD SANT 88 131 IPR001005 -
Sebi361g00051 181 Pfam Myb-like DNA-binding domain 37 94 - -
Sebi361g00051 181 FunFam Transcription factor MYB44 88 134 - -
Sebi361g00051 181 SMART sant 85 133 IPR001005 -
Sebi361g00051 181 SMART sant 33 82 IPR001005 -
Sebi361g00051 181 CDD SANT 36 78 IPR001005 -
Sebi361g00051 181 PANTHER MYB PROTEIN-RELATED 34 142 - -
Sebi361g00051 181 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi361g00051 Sebi-Chr361 911469 912014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi361g00051 31 149 MYB Transcription Factor Family AT3G50060 73.109 1.72e-59 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sebi361g00051 Myb_DNA-bind_6 5e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi361g00051 - - lja:Lj5g3v0065670.1 237.269