Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi361g00027 ATGTCTAGTCGGAGTGAACACCAATCGGTTCCCCTTTCGGTGCTGCTGAAGCGTGAATTGGCAAACGAGAAAATCGAGAAGCCGGATGTTGTAATTACACACGGCCAAGCTAGCGAGAACAAGAAAGGAGAGGATTTCACGCTCGTAAAGACGGAATGTCAAAGGGTGGTGGGAGATGGGGTCTCTACATATTCTGTTTTTGGGCTTTTCGATGGACACAATGGACCTGCTGCTGCTATTTATGCCAAGGAGAATCTTCTAAACAATGTTTTAAGTGCAATTCCTCCAGATCTTAACAGAGATGAGTGGGCACAAACATCGGGAACAACTGTAACTTTTGTAATTATAGAAGGATGGGTTATAACAGTAGCATCAGTTGGTGATTCTCGTTGCATACTTGAACCTTCTGAAGGTGGAATATATTACTTGTCAGCAGATCATAGACTAGAAAGCAACGAAGAGGAGAGGGTGCGCATCACTTCTAGTGGCGGTGAAGTTGGTCGGCTAAATACAGGTGGAGGTGCACAGGTTGGTCCATTGAGATGTTGGCCAGGTGGCTTGTGTCTCTCCCGATCTATTGGTGATATGGATGTTGGCGAATATATTGTCCCTGTACCATACGTAAAGCAAGTGAAGCTTTCCACTGCTGGAGGAAGGCTTATTATCAGCAGTGATGGGGTCTGGGATGCTTTAACTGCAGATATGGTTCTTGATTGTTGTCGTGGCATGTCAGCAGAGGCTGCAGCACCACATATTGTGAAAGTATGCCTAACGTCATTTTGTGGGATATGTACTCATTTCTGCCATTTATTCCTGACTCTTTTCTTTCTTCAGGAAGCTTTACAAGCAAAGGGACTTAGAGATGACACAACCTGCATCGTTGTTGATATATTAGCCCATGAGAAGCCACCTACTTCTGTTCCAACACAGAAGAAACCAGTAAAAGGAATGTTGAAGTCCATTTTCCGCAAAAAGTCCTCTGAATCATCTAATATTTTCAAAGAATACTTGGAGCCAGATGTGGTACGGGAACTATATGAGGAAGGATCTGCTTTTCTTTCAGAGAGGTTAGAAACAAAATATCCACTCTGCAACATGTTCAAGTTGTTCGTGTGTGCAGTGTGTCAAGCAGAGATTAAACCAGGGGAGGGTATTTCAATACATGAGGGTGCACTGAACCCGGCAAGATTGCGTCCCTGGGATGGACCTTTCCTTTGCATAAGTTGCCAAGAGAAGAAAGAAGCCATGGAAGGGAAACGAACATCAGATAGACTAAGCAGCGGAAGTGACTAA 1293 0.4424 MSSRSEHQSVPLSVLLKRELANEKIEKPDVVITHGQASENKKGEDFTLVKTECQRVVGDGVSTYSVFGLFDGHNGPAAAIYAKENLLNNVLSAIPPDLNRDEWAQTSGTTVTFVIIEGWVITVASVGDSRCILEPSEGGIYYLSADHRLESNEEERVRITSSGGEVGRLNTGGGAQVGPLRCWPGGLCLSRSIGDMDVGEYIVPVPYVKQVKLSTAGGRLIISSDGVWDALTADMVLDCCRGMSAEAAAPHIVKVCLTSFCGICTHFCHLFLTLFFLQEALQAKGLRDDTTCIVVDILAHEKPPTSVPTQKKPVKGMLKSIFRKKSSESSNIFKEYLEPDVVRELYEEGSAFLSERLETKYPLCNMFKLFVCAVCQAEIKPGEGISIHEGALNPARLRPWDGPFLCISCQEKKEAMEGKRTSDRLSSGSD 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi361g00027 430 Gene3D - 10 298 IPR036457 -
Sebi361g00027 430 Pfam Protein phosphatase 2C 103 251 IPR001932 -
Sebi361g00027 430 ProSiteProfiles PPM-type phosphatase domain profile. 29 297 IPR001932 -
Sebi361g00027 430 PANTHER PROTEIN PHOSPHATASE 34 296 IPR015655 GO:0004722|GO:0006470
Sebi361g00027 430 SMART PP2C_4 23 295 IPR001932 -
Sebi361g00027 430 SUPERFAMILY PP2C-like 40 297 IPR036457 -
Sebi361g00027 430 CDD PP2Cc 40 297 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi361g00027 Sebi-Chr361 459317 463239 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi361g00027 1 430 PP2C-type Phosphatase Gene Family AT1G47380 69.824 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi361g00027 - - gmx:100796959 722.62