Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi361g00012 ATGAATTTCAAAGGTTTTATTAACGAACCAGGGGCAGCCGATAACGGCGGCGGAGGGAGGCCGCCGGCGGGGAACTTTCCCCTGACGCGGCAGCCGTCGGTGTACTCGCTGACGGTCGACGAGTTCATGAATAGCATGGCGGGTTCAGGGAAGGATTTTGGGTCGATGAACATGGATGAGTTGCTGAAAAACATTTGGAGCGCTGAAGAGGTTCAAACAATGGGAGGAGGAGAAGAAGGTGTTAGCCATTTGCAGAGACAAGGGTCGTTGACACTGCCTCGGACACTTAGCCAGAAAACAGTGGATGAGGTTTGGAAGGATATTTCTAGGGATTATGGTCCTAATTTGGCTGCACCACAGGCTCAGAGACAGCCAACTTTGGGAGAGATGACTTTGGAGGAGTTCTTGGTGAGAGCTGGTGTTGTTAGAGAAGATGCAAAACCAAATGATGGAGTATTTGTTGATCTTGCTCGTGCAGCTAATAATAGTGGTTTAGGATTGGGGTTTCAGGCTCAGGCTCAGGCTCAGCAATTGAACAAGGTTACTGGTTTGATGGGTAATAGGAATGATGATCCACTTATGAGCCTTCATGCTTCTACTAATTTGCCCTTGAATGTTAATGGGGTTCGATCATCCAATCAGCAACCTATGCAGAGTCCACACTCTCATCACCAGCAACACCAACAACAGATATTTCCTAAGCAACCTGCTTTGAGCTATGCAACTCAGATGCCTCTTACTAGTAATCAAGGAATCAGGAGTGGAATTGTGGGGCTTTCTGCTGCTGATCAGGGACTGAATGCTAATCTTGTGCAAGGTGGAGGGATTGGTATGGTTGGTTTGGCACCAGGGCCTGTTCAACTTGCTAGTGGGTCACCTGCTAGTGATAAAATTGGAAAGAGCAATGGTGACACTTCTTCTGTATCACCAGTTCCTTATGTCTTTAATGGTGGTCTGAGAGGGAGGAAGAGTGGTGGAGCTGTGGAGAAGGTAATTGAGAGGAGGCAGAGAAGAATGATAAAGAATAGAGAATCAGCTGCTAGGTCTCGGGCTCGCAAGCAGGCTTATACCATGGAATTGGAAGCAGAGGTTCAAAAGTTAAAAGAGGAGAATGAAGAACTTCAGAAAAAGCAGGCGGAAATCATGGAAATTCAGAAAAATCAATCATTGCATGTATTTGAATTGACCTTAACTATGCAAGTCATAGATTTTTCATTTTCCTGGGATTGA 1230 0.4602 MNFKGFINEPGAADNGGGGRPPAGNFPLTRQPSVYSLTVDEFMNSMAGSGKDFGSMNMDELLKNIWSAEEVQTMGGGEEGVSHLQRQGSLTLPRTLSQKTVDEVWKDISRDYGPNLAAPQAQRQPTLGEMTLEEFLVRAGVVREDAKPNDGVFVDLARAANNSGLGLGFQAQAQAQQLNKVTGLMGNRNDDPLMSLHASTNLPLNVNGVRSSNQQPMQSPHSHHQQHQQQIFPKQPALSYATQMPLTSNQGIRSGIVGLSAADQGLNANLVQGGGIGMVGLAPGPVQLASGSPASDKIGKSNGDTSSVSPVPYVFNGGLRGRKSGGAVEKVIERRQRRMIKNRESAARSRARKQAYTMELEAEVQKLKEENEELQKKQAEIMEIQKNQSLHVFELTLTMQVIDFSFSWD 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi361g00012 409 Gene3D - 332 388 - -
Sebi361g00012 409 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 332 383 IPR004827 GO:0003700|GO:0006355
Sebi361g00012 409 SMART brlzneu 330 397 IPR004827 GO:0003700|GO:0006355
Sebi361g00012 409 MobiDBLite consensus disorder prediction 209 233 - -
Sebi361g00012 409 Pfam bZIP transcription factor 334 383 IPR004827 GO:0003700|GO:0006355
Sebi361g00012 409 CDD bZIP_plant_BZIP46 334 388 - -
Sebi361g00012 409 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 337 352 IPR004827 GO:0003700|GO:0006355
Sebi361g00012 409 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 28 380 IPR043452 GO:0003700|GO:0045893
Sebi361g00012 409 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 5 332 389 - -
Sebi361g00012 409 MobiDBLite consensus disorder prediction 1 28 - -
Sebi361g00012 409 SUPERFAMILY Leucine zipper domain 334 382 IPR046347 GO:0003700|GO:0006355
Sebi361g00012 409 Coils Coil 350 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi361g00012 Sebi-Chr361 241880 244067 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi361g00012 28 371 bZIP Transcription Factor Family AT1G45249 50.518 1.89e-90 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sebi361g00012 bZIP_1 8.1e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi361g00012 K14432 - gmx:100819313 491.115