Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi361g00009 ATGGACTCTATTGAGCAGTTAAAGTCATCATCAGAGGATCAAATGGACATCATGATGATGATGATGCAACTCCCTGAATTTTCTGCACCTAATAACTGTCACGACGGTTTTCCACCGTCGGAAGAGTTCTGTGGTGCTACTACTAACAATATACGCAGTACTACTACTATGCCACTAGCAGATTTAATAGATAATAACTCTCCTATGCCTTGGTCCTCATTCACACACATACCATCCACAACCACAATCTCTTTCGCTAATAACCCTATGCTTCAACAACAAGAACAAACGACGTCGTCAAATTGGAAAGCCACCACCGCGAACGAGTCGTCGGAGAAGCGGAACTCGATGGCGGCGATGAGAGAGATGATATTCAGGATAGCGGCGATGCAGCCAATACACATAGACCCTGAGTCAGTGAAGCCACCGAAGAGAAGGAACGTGAAGATTTCAAAGGATCCACAGAGCGTGGCGGCGCGTCACCGGAGAGAAAGGATAAGTGAGAGAATAAGGATACTGCAGAGATTAGTGCCTGGAGGGACTAAGATGGACACTGCTTCTATGTTGGATGAAGCTATTCATTACGTCAAGTTTCTCAAGACACAGGTCCAGTCACTTGAACGAGCCAGCTCTGTCAATAATAATACTGTAGGGATAGGGTTCCCTGTTGCAATGTCTAGTAGGAGTACTGTTCCCACCCCTAATTATCATCTTCCTCTACCTAAGCCTTATCAACCCCTAAATGTTGAGTATTATGGAGAATAG 765 0.451 MDSIEQLKSSSEDQMDIMMMMMQLPEFSAPNNCHDGFPPSEEFCGATTNNIRSTTTMPLADLIDNNSPMPWSSFTHIPSTTTISFANNPMLQQQEQTTSSNWKATTANESSEKRNSMAAMREMIFRIAAMQPIHIDPESVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERASSVNNNTVGIGFPVAMSSRSTVPTPNYHLPLPKPYQPLNVEYYGE 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi361g00009 254 Gene3D - 149 217 IPR036638 GO:0046983
Sebi361g00009 254 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 34 235 IPR045843 GO:0003700|GO:0006355
Sebi361g00009 254 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 150 199 IPR011598 GO:0046983
Sebi361g00009 254 MobiDBLite consensus disorder prediction 92 114 - -
Sebi361g00009 254 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 154 209 IPR036638 GO:0046983
Sebi361g00009 254 FunFam BHLH transcription factor 153 217 - -
Sebi361g00009 254 CDD bHLH_AtIND_like 151 207 - -
Sebi361g00009 254 SMART finulus 156 205 IPR011598 GO:0046983
Sebi361g00009 254 Pfam Helix-loop-helix DNA-binding domain 159 199 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi361g00009 Sebi-Chr361 155103 155867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi361g00009 116 217 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 87.255 3.89e-49 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sebi361g00009 HLH 1.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi361g00009 - - gmx:100788158 271.166