Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi361g00008 ATGGCTCTTATGCTAGAGAACTGTGAAGGCATTTTACTGTCATTAGAGTCACACAAAGCAGTTCCAGCACCTTTCCTGACGAAGACATACCAACTAGTAGACGATCCCGCCACAGATCACATAGTCTCTTGGGGAGAAGACGACACCACCTTCGTCGTTTGGCGTCCTCCTGAGTTCGCTAGGGACCTTCTCCCTAACTACTTCAAGCACAACAACTTCTCCAGCTTCGTTCGCCAGCTCAACACCTATGGTTTTAGAAAGATTGTGCCAGATAGATGGGAGTTTGCTAATGAATTCTTCAAGAAAGGAGAGAAGCATTTGCTGTGTGAGATCCATAGAAGGAAAACTGCTCAGCCTCATCAACAACAACCAGACAGAATGAATCATCATCATCATCCACTTGGAGGATCAGTGAATGTTCCTTCTTTCTTTCCATTCTCAAGCAATAGAGTGAGTATCTCTCCTCCCAATGACTCGGATGAGCAACTCAATAATTGGTGTGACTCTCCACCACTCACTTCTCCAAGAGTAACAAACTACAACACTTCAGTAACCGCTCTTTCAGAGGACAATGAGAGACTCAGGAGAAGCAACAACATGCTCATGACGGAGCTTGCACACATGAAGAAGCTCTATAATGACATAATCTACTTCGTTCAGAATCATGTCAAACCAGTGACTCCAAGCAACTCTTACACTCCTTCTTTCCTACTCTGCAATACACCACAACAACCTTCCACTACTAGTAATGTTTCAATGCTGCAACAAAGGCCAATGAACCAGCTTCTCGGCTATTATTCTTCAACTAACCCTAAGCAATATTCCACAACTCAACCTCATGTTGTGAACTCTTCCAGTCCAACCAACACATCAAGGAGCTCTATAACGGTTGTGGAAGGTCCTAACAGTAACAGCTGCAAGACGAAGCTTTTTGGAGTATCTCTTCAGTCTAAAAAAAGAGTGCACCCTGAGTATGGATCTAATAATCCAATTAATTCGGAGACCAACAAGGCTCGTTTGGTTTTGGAAAAAGATGACTTGGTACTGGATCATTTTCCATACGCTCCTGTTCTCTTTTGCTGA 1083 0.4349 MALMLENCEGILLSLESHKAVPAPFLTKTYQLVDDPATDHIVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANEFFKKGEKHLLCEIHRRKTAQPHQQQPDRMNHHHHPLGGSVNVPSFFPFSSNRVSISPPNDSDEQLNNWCDSPPLTSPRVTNYNTSVTALSEDNERLRRSNNMLMTELAHMKKLYNDIIYFVQNHVKPVTPSNSYTPSFLLCNTPQQPSTTSNVSMLQQRPMNQLLGYYSSTNPKQYSTTQPHVVNSSSPTNTSRSSITVVEGPNSNSCKTKLFGVSLQSKKRVHPEYGSNNPINSETNKARLVLEKDDLVLDHFPYAPVLFC 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi361g00008 360 Gene3D - 17 116 IPR036388 -
Sebi361g00008 360 SMART hsfneu3 21 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Sebi361g00008 360 FunFam Heat stress transcription factor B-4 17 115 - -
Sebi361g00008 360 ProSitePatterns HSF-type DNA-binding domain signature. 64 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Sebi361g00008 360 MobiDBLite consensus disorder prediction 273 301 - -
Sebi361g00008 360 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Sebi361g00008 360 PRINTS Heat shock factor (HSF) domain signature 25 48 IPR000232 GO:0003700|GO:0006355|GO:0043565
Sebi361g00008 360 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Sebi361g00008 360 SUPERFAMILY "Winged helix" DNA-binding domain 22 114 IPR036390 -
Sebi361g00008 360 Pfam HSF-type DNA-binding 25 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Sebi361g00008 360 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 18 276 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi361g00008 Sebi-Chr361 127733 129230 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi361g00008 1 350 HSF AT1G46264 58.933 8.56e-127 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Sebi361g00008 HSF_DNA-bind 2.8e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi361g00008 K09419 - gmx:100781389 551.977