Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi361g00003 ATGGAACCTCCTCTGCCGAAAGAGTACTTTGGAAACTCAATTGGTATGGTGAGTGCAGAGGCGAAGGCAGGGGAATTGCTTGAGAAGGATCTGGGATGGGCAGCATGGAAGTTGCATCTGGCTGTTGCAAACCGTAACGATGAAGAGGTGCGACGGTTACTCAAAGAATGGTCGCAATCTCCTGTTGTATTCCAGCTTGGTCACCACTTTGAAGCCAACAGTGTGACGATGTCAAGTTCACCAAGGTTCAACATGTATGGGAATGAATTTGGAATGGGGAAAGCTGTGGCGGTTTTGAGTGGCTATGCCAATAAATTTGATGGCAACGTGACAGGATATGAAGGATATGGAGGAGGGGGAAGCATAGATTTGGCTGTGTCCCTTTCGCCTGATGCAATGAGAGCCCTGGAATCAAACGAGGAGTTCATGGAGGCAGTTTCTGTGCCCAATCCCTTTTACTAG 462 0.4827 MEPPLPKEYFGNSIGMVSAEAKAGELLEKDLGWAAWKLHLAVANRNDEEVRRLLKEWSQSPVVFQLGHHFEANSVTMSSSPRFNMYGNEFGMGKAVAVLSGYANKFDGNVTGYEGYGGGGSIDLAVSLSPDAMRALESNEEFMEAVSVPNPFY 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi361g00003 153 Gene3D - 1 139 IPR023213 -
Sebi361g00003 153 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 144 - -
Sebi361g00003 153 Pfam Transferase family 1 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi361g00003 Sebi-Chr361 19693 20154 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi361g00003 1 137 Monolignol Biosynthesis Gene Families AT5G48930 26.429 3.06e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi361g00003 - - lja:Lj1g3v1664450.1 226.098