Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi361g00001 ATGAGTTCCCCTGCCGTTCTTCGCGTTTCAGAATGCTTCATCAAGCCGCAGCACCCCACCCAAGAAGATGCAAACCAACTTTACTATTTAACCCCTTCAGATATTGCTATGTTGACTGTCAACTACATCCAGAAAGGCCTTCTCTTCAAGAAGCCTGTTATTGTTAATCAACAAGATTTCATCAATAATCTCTTGTATAAGCTCAAACACTCTCTTTCTCTCGCCCTCATTCATTTCTATCCCCTGGCTGGCCGCCTCGTTACCAAAACATCCCAAGATCCTCCCTCTTATTATGTTTTCGTAGATTGCAGTAACAGTGCCGGAGCCAGATTCATCTATGCAACTTTAGATATGACCATATCTGACATCCTCTCCCCAATTGATGTCCCACCCATTGTTCAGTCATTTTTTGACCACCACAAAGCAGTCACCCATGACGGTCATACCATGCCTTTATTGTCCATCCAAGTCACTGAGCTTGTTGATGGAATTTTTATTGGCTGTTCCATGAACCACTGTATTGCTGATGGGACTTCCTATTGGAATTTCTTTAATACATGGTCTCACATCTTTCAAGCTCAAGGGCAAGGGCATGGGCATGATGATGTACCAATTCCGCACCCACCCATTCACAATCGCTGGTTTCCAGAAGGTTGCGGTCCACTAATCAATCTCCCCTTCAAACATCATGATGAGTTTATTAGCAGATATGAAACACCAAAACTTAGAGAGAGGGTCTTTCACTTTTCAGCAGAGTCCATTGCAAAACTGAAAGCAAAGGCCAACTTAGAGTCAAATACAACCAAAATCTCTTCATTCCAGTCACTGTCAGCACTCGTTTGGAGATCCGTAATTCGTGCGCGCCGCCCATCATATGACCAGAGAACCAGTTGCAAGTTGGCCACAAACAATCGATCAAGAATGGAACCGCCTCTGCCTCAGGAATATTTTGGAAACTCAATTTATGTAGTTGGTGCAGAGGCAACAGTAGGGGAATTGGTTGAGAAGGATCTGGGATGGGCAGCATGGAAGTTGCATCTGGCTGTTGCAAACCATAACGACAGAGCGGTGCGCCAGTTCCTTAAAGAATGGGTACAGTCTCCTGTCGTCTTTCAACCGGGTCGGTTATTTGACCCGTTTACTGTGATGATGGGTAGTTCACCAAGGTTCAACATGTATGGGAATGAATTTGGAATGGGGAAAGCGGTAGCGGTTAGAAGTGGGTATGCTAACAAATTTGATGGAAAAGTGACATCATATCCAGGTCATGAAGGAGGCGGGAGCGTTGATTTGGAAATGTGTCTTTCGGCAGATACAATGAGTGCGCTGGAATCAGACGAGGAATTCATGAATTCGGTTTCAGACTCCAATCCCATCTACTAG 1383 0.4476 MSSPAVLRVSECFIKPQHPTQEDANQLYYLTPSDIAMLTVNYIQKGLLFKKPVIVNQQDFINNLLYKLKHSLSLALIHFYPLAGRLVTKTSQDPPSYYVFVDCSNSAGARFIYATLDMTISDILSPIDVPPIVQSFFDHHKAVTHDGHTMPLLSIQVTELVDGIFIGCSMNHCIADGTSYWNFFNTWSHIFQAQGQGHGHDDVPIPHPPIHNRWFPEGCGPLINLPFKHHDEFISRYETPKLRERVFHFSAESIAKLKAKANLESNTTKISSFQSLSALVWRSVIRARRPSYDQRTSCKLATNNRSRMEPPLPQEYFGNSIYVVGAEATVGELVEKDLGWAAWKLHLAVANHNDRAVRQFLKEWVQSPVVFQPGRLFDPFTVMMGSSPRFNMYGNEFGMGKAVAVRSGYANKFDGKVTSYPGHEGGGSVDLEMCLSADTMSALESDEEFMNSVSDSNPIY 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi361g00001 460 Gene3D - 9 222 IPR023213 -
Sebi361g00001 460 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 451 - -
Sebi361g00001 460 FunFam Tryptamine hydroxycinnamoyl transferase 228 446 - -
Sebi361g00001 460 Pfam Transferase family 12 450 - -
Sebi361g00001 460 Gene3D - 230 445 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi361g00001 Sebi-Chr361 6680 8062 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi361g00001 68 444 Monolignol Biosynthesis Gene Families AT5G48930 29.620 2.11e-35 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi361g00001 - - gmx:100787228 729.169