Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi35g00052 ATGGAAGTCACCACCAACACTTTGTTCTGTTTGTTTGCTTCTTTTCTCTTCATTGTTCTGTTCAAATCACTCATCAAATCCTTCTCCTTCACCTCCAAAAGGAGACAATTGCCACTCCCTCCTGGTTCCATGGGTTGGCCTTACATAGGTGAAACCTTTCAAATGTATTCTCAAGACCCAAATGTCTTCTTTGCCAACAAAATCAAGAGGTTTGGCTCTATGTTCAAGTCCCATATTTTGGGTTGTCCTTGTGTGATGATTTCTAGCCCAGAAGCAGCTAAATTTGTGTTGAACAAAGCTCAACTCTTCAAACCAACATTTCCTGCTAGCAAAGAAAGGATGTTGGGGAAGCAAGCAATTTTCTTTCACCAAGGAGTATACCATGCTAACCTAAGGAGGCTTGTCCTTCGTACCTTTATGCCTCAAGCCATACAAAACATTGTCCCTGACATTGAATCCATTGCCCTAAGTTGCCTCAAATCATGGGAAGGAAAATTGATCACCACTTTCCTTGAAATGAAAAATTTCACCTTCAATGTTGCCCTGCTTTCAATTTTTGGGAAAGATGAAATTCTATACAGAGAGGACCTAAAACGATGCTACTACACACTTGAGAAAGGGTACAACTCAATGCCCATAAACCTTCCAGGGACACTGTTCCACAAGGCTATGAAGGCAAGGAAAGAGCTTGCTCAGATCTTGGCACAAATCATCTCAAAAAGGAGGAATATGAAGCAAGAGTACAATGACTTGTTGGGTTCTTTCATGGGTGAGAAAGCAGGTCTCACTGATGAACAGATAGCAGATAACATAATTGGTGTCATTTTTGCTGCTCGTGACACCACTGCTAGTGTACTTACGTGGATTGTCAAGTACCTTGGTGAAAACCCAAGTGTCCTAGAAGCAGTTACAGAAGAGCAAGAGTCTATACTAAAGAGCAAACAAGAAAGTGGTGAAGAAATGGGTCTAACTTGGGCAGACACAAAAAATATGCCATTAACATCAAGGGTCATACAAGAGACTCTAAGAGTTGCATCAATTTTGTCTTTTACTTTCAGAGAAGCCATAGATGATGTTGAATATCAAGGGTATCTTATACCAAAAGGGTGGAAAGTATTACCACTTTTTAGAAATATACACCACAGTCCAGATAACTTCAAAGAGCCAGAGAAATTTGATCCTTCAAGATTTGAGGTTGCACCAAAACCCAATACCTTCATGCCATTTGGCAATGGGACCCATGCATGTCCTGGCAATGAATTAGCCAAGTTGGAGATTTTGGTGCTTGTACATCATCTGACCACAAAGTACAGGTGGTCTGTGGTCGGTGCAAAAAATGGAATTCAGTATGGTCCTTTTGCTCTTCCCCAAAATGGCTTGCCCATCACATTATTGCCTAAGAAATAA 1407 0.4087 MEVTTNTLFCLFASFLFIVLFKSLIKSFSFTSKRRQLPLPPGSMGWPYIGETFQMYSQDPNVFFANKIKRFGSMFKSHILGCPCVMISSPEAAKFVLNKAQLFKPTFPASKERMLGKQAIFFHQGVYHANLRRLVLRTFMPQAIQNIVPDIESIALSCLKSWEGKLITTFLEMKNFTFNVALLSIFGKDEILYREDLKRCYYTLEKGYNSMPINLPGTLFHKAMKARKELAQILAQIISKRRNMKQEYNDLLGSFMGEKAGLTDEQIADNIIGVIFAARDTTASVLTWIVKYLGENPSVLEAVTEEQESILKSKQESGEEMGLTWADTKNMPLTSRVIQETLRVASILSFTFREAIDDVEYQGYLIPKGWKVLPLFRNIHHSPDNFKEPEKFDPSRFEVAPKPNTFMPFGNGTHACPGNELAKLEILVLVHHLTTKYRWSVVGAKNGIQYGPFALPQNGLPITLLPKK 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi35g00052 468 Gene3D Cytochrome P450 29 465 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi35g00052 468 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 409 418 IPR017972 GO:0005506|GO:0016705
Sebi35g00052 468 PRINTS P450 superfamily signature 277 294 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi35g00052 468 PRINTS P450 superfamily signature 407 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi35g00052 468 PRINTS P450 superfamily signature 416 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi35g00052 468 PRINTS P450 superfamily signature 336 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi35g00052 468 PANTHER CYTOCHROME P450 26 35 444 - -
Sebi35g00052 468 FunFam Abscisic acid 8 29 466 - -
Sebi35g00052 468 Pfam Cytochrome P450 40 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi35g00052 468 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi35g00052 468 PRINTS E-class P450 group I signature 406 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi35g00052 468 PRINTS E-class P450 group I signature 286 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi35g00052 468 PRINTS E-class P450 group I signature 375 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi35g00052 468 PRINTS E-class P450 group I signature 335 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi35g00052 468 PRINTS E-class P450 group I signature 416 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi35g00052 468 PRINTS E-class P450 group I signature 266 283 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi35g00052 468 SUPERFAMILY Cytochrome P450 33 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi35g00052 468 CDD CYP90-like 68 466 - -
Sebi35g00052 468 Coils Coil 227 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi35g00052 Sebi-Chr35 2076038 2078261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi35g00052 11 462 Cytochrome P450 AT4G19230 74.009 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi35g00052 K09843 - gmx:100170674 839.721