Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi35g00043 ATGCCACAAACATGCATAATAGCACCCAAACCAGAACCAGAACACAGCATGAATCACCCTGTGGAAGGGTCACAAGAGATGACTGAGTACCATAACTCAACTGTCCTTTCCTACCCCATACAAACTAATGACCAATCTTTCCAAAAACTCACTATGTACCCCATAACTTTGAAGTTTGAGGAATTGGTGTACAAAGTTAAATTAGAGCAGAAGGGTCTTTGTTGGGGTAGCAGAGGGACTTGCAGAGAGAAGACCATATTGAATGGTGTTTCAGGTATGGTTTTCCCAGGTGAAATACTGGCTATGTTGGGGCCATCTGGAAGTGGCAAAACCACACTTCTCACAGCACTTGGAGGACGTCTGAGTGGCAAATTATCTGGAAAGATAACATACAACAATCAGCCTTTCTCAGGTACCATGAAAAGAAGAACAGGTTTTGTGGCCCAAGATGATGTGTTATACCCTCATCTCACAGTAATTGAGACTCTAGTCTTCACTGCACTTTTAAGGCTGCCTAATAGTTTGACCAGGTATGAGAAAGTTCAACATGTAGAGAATGTCATCAATGAGCTAGGACTGACAAGGTGCAGGAATAGCATGATTGGAGGCCCACTTTTCAGAGGAATATCAGGTGGAGAGAAAAAGAGGGTGAGTATAGGCCAGGAAATGCTCATTAATCCAAGTCTCTTGCTGTTAGATGAGCCCACTTCAGGTTTGGACTCAACAACAGCACAAAGGATACTCAACACAATCAAATGCCTTGCTAGTGGGGGGAGAACTGTTGTCACTACCATTCATCAACCTTCTAGTCGTCTCTACCATATGTTTGATAAGGTGGTCTTGCTCTCAGAAGGGTGCCCCATCTATTATGGCCCTGCTTCAACTGCCATGGAGTACTTTTCTTCAATTGGTTTTTCCACACCCATGACTGTCAATCCAGCTGATTTGTTGCTTGATCTTGCTAATGGGATTGCCCCAGATTCCAAGCATGCAACTGAACAAAGTGAGAGCCAGGAACCAGAAAGGAAGTTGGTGAGAGAAACCCTTGTCTCTGCCTATGAAAAGAACATAGCTACAAGGCTGAAGGCTGAGTTTTGCAGCTTGGAGGTGAACAACTACAACATCACCAAAGATGCTTCTGCAAGTAGGTGGCATTTCCTTCAAAAGTTTACTGCTTTTGTTTTAATACAAGTCATTCAGAGGGGACTCAGGGAGAGAAGGTACGATGCCTTCAACAGGCTGAGAATATTCCAAGTCATAAGTGTTGCTTTTCTTGGTGGACTCCTGTGGTGGCAAACACCAGAATCTCACATTGGAGACCGTATAGCCCTGCTCTTTTTCTTCTCTGTTTTCTGGGGATTCTACCCTCTCTACAATGCTGTTTTTACATTTCCTCAAGAGAGAAGAATGCTGATAAAGGAAAGGTCATCAGGGATGTACCGTCTCTCTTCCTATTTTCTAGCTAGAACAATAGGTGACTTGCCATTGGAGCTTGCACTTCCAACTGCATTTGTCTTCATAATCTATTGGATGGGAGGGCTTAAACCTCATCCTATGACCTTTATCCTTTCCCTTTTTGTGGTTCTTTACAGTGTCCTTGTTTCTCAAAGTCTTGGCTTAGCATTTGGTGCTATTTTGATGGAAGTTAAACAAGCAACTACTTTAGCTTCTGTGACAACACTTGTATTTCTCATTGCTGGAGGGTACTACATACAACAGATTCCTCCTTTCATAGAATGGCTCAAGTACTTAAGCTATAGCTACTATTGTTACAAGCTTCTTCTTGGGGTGCAGTACAATGATGATGATTATTATGAGTGCTCAAAAGGGGTCCTGTGCAAGGTTGGAGATTTTCCTCCTATTAAATCAATGGGTTTGAATCATATGTGGGTTGATGTGTTCATTATGGCCTTGATGTTGGTGGGTTATAGACTAGTTGCTTATTTAGCACTGCAGAGAGTGAGGTAG 1968 0.4273 MPQTCIIAPKPEPEHSMNHPVEGSQEMTEYHNSTVLSYPIQTNDQSFQKLTMYPITLKFEELVYKVKLEQKGLCWGSRGTCREKTILNGVSGMVFPGEILAMLGPSGSGKTTLLTALGGRLSGKLSGKITYNNQPFSGTMKRRTGFVAQDDVLYPHLTVIETLVFTALLRLPNSLTRYEKVQHVENVINELGLTRCRNSMIGGPLFRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAQRILNTIKCLASGGRTVVTTIHQPSSRLYHMFDKVVLLSEGCPIYYGPASTAMEYFSSIGFSTPMTVNPADLLLDLANGIAPDSKHATEQSESQEPERKLVRETLVSAYEKNIATRLKAEFCSLEVNNYNITKDASASRWHFLQKFTAFVLIQVIQRGLRERRYDAFNRLRIFQVISVAFLGGLLWWQTPESHIGDRIALLFFFSVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFLARTIGDLPLELALPTAFVFIIYWMGGLKPHPMTFILSLFVVLYSVLVSQSLGLAFGAILMEVKQATTLASVTTLVFLIAGGYYIQQIPPFIEWLKYLSYSYYCYKLLLGVQYNDDDYYECSKGVLCKVGDFPPIKSMGLNHMWVDVFIMALMLVGYRLVAYLALQRVR 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi35g00043 655 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 37 648 - -
Sebi35g00043 655 Pfam ABC-2 type transporter 266 349 IPR043926 GO:0140359
Sebi35g00043 655 ProSitePatterns ABC transporters family signature. 209 223 IPR017871 GO:0005524|GO:0016887
Sebi35g00043 655 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 57 309 IPR003439 GO:0005524
Sebi35g00043 655 SMART AAA_5 96 286 IPR003593 GO:0016887
Sebi35g00043 655 Pfam ABC transporter 87 237 IPR003439 GO:0005524
Sebi35g00043 655 Gene3D - 71 303 IPR027417 -
Sebi35g00043 655 Pfam ABC-2 type transporter 398 599 IPR013525 GO:0016020|GO:0140359
Sebi35g00043 655 FunFam ABC transporter G family member 22 75 303 - -
Sebi35g00043 655 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 82 305 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi35g00043 Sebi-Chr35 1637847 1640756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi35g00043 86 285 Calmodulin-binding Proteins AT2G36910 29.808 1.18e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi35g00043 K05681 - gmx:100794774 1078.16